working on chimera.slayer

[mothur.git] / chimerarealigner.cpp

diff --git a/chimerarealigner.cpp b/chimerarealigner.cpp
index a07e43392a1d96727d4870154bccef452119755b..48d9bc16a14b3afa8ad7588141cc9ffaaf2e03c2 100644 (file)
--- a/chimerarealigner.cpp
+++ b/chimerarealigner.cpp
@@ -82,7 +82,6 @@ void ChimeraReAligner::reAlign(Sequence* query, vector<results> parents) {
                        //make sure you don't cutoff end of query 
                        if (parents[parents.size()-1].nastRegionEnd < (qAligned.length()-1)) {  newQuery += qAligned.substr(parents[parents.size()-1].nastRegionEnd+1);  }
                        
-                       //set query to new aligned string
                        query->setAligned(newQuery);
 
                        //free memory