1.23.0

[mothur.git] / chimeraperseuscommand.cpp

diff --git a/chimeraperseuscommand.cpp b/chimeraperseuscommand.cpp
index 61970d53ac38a3f9877e5a010e48bc0b336dc669..8eaf536040a5703bbd7d9f4b93329f79cf6c6830 100644 (file)
--- a/chimeraperseuscommand.cpp
+++ b/chimeraperseuscommand.cpp
@@ -345,16 +345,16 @@ ChimeraPerseusCommand::ChimeraPerseusCommand(string option)  {
                        
                        string temp = validParameter.validFile(parameters, "processors", false);        if (temp == "not found"){       temp = m->getProcessors();      }
                        m->setProcessors(temp);
-                       convert(temp, processors);
+                       m->mothurConvert(temp, processors);
                        
                        temp = validParameter.validFile(parameters, "cutoff", false);   if (temp == "not found"){       temp = "0.50";  }
-                       convert(temp, cutoff);
+                       m->mothurConvert(temp, cutoff);
                        
                        temp = validParameter.validFile(parameters, "alpha", false);    if (temp == "not found"){       temp = "-5.54"; }
-                       convert(temp, alpha);
+                       m->mothurConvert(temp, alpha);
                        
                        temp = validParameter.validFile(parameters, "cutoff", false);   if (temp == "not found"){       temp = "0.33";  }
-                       convert(temp, beta);
+                       m->mothurConvert(temp, beta);
                }
        }
        catch(exception& e) {