major change to the tree class to use the count table class instead of tree map....

[mothur.git] / chimeraperseuscommand.cpp

diff --git a/chimeraperseuscommand.cpp b/chimeraperseuscommand.cpp
index e57c48a7e168cb0b1afa719e425be7c423b5aa62..7ae5d69141979736bcb2b6fcfb25e1ba4682086d 100644 (file)
--- a/chimeraperseuscommand.cpp
+++ b/chimeraperseuscommand.cpp
@@ -295,7 +295,7 @@ ChimeraPerseusCommand::ChimeraPerseusCommand(string option)  {
                                        bool ignore = false;
                                        if (countfileNames[i] == "current") { 
                                                countfileNames[i] = m->getCountTableFile(); 
-                                               if (nameFileNames[i] != "") {  m->mothurOut("Using " + countfileNames[i] + " as input file for the count parameter where you had given current."); m->mothurOutEndLine(); }
+                                               if (countfileNames[i] != "") {  m->mothurOut("Using " + countfileNames[i] + " as input file for the count parameter where you had given current."); m->mothurOutEndLine(); }
                                                else {  
                                                        m->mothurOut("You have no current count file, ignoring current."); m->mothurOutEndLine(); ignore=true; 
                                                        //erase from file list