modified chimera commands to process multiple fasta files and added checks to pintail...

[mothur.git] / chimerabellerophoncommand.h

diff --git a/chimerabellerophoncommand.h b/chimerabellerophoncommand.h
index e450b52bbe3326f5677cd914f0fa19c9c7970962..4ff7f799202f9403b8793a625ee0a551354a69a2 100644 (file)
--- a/chimerabellerophoncommand.h
+++ b/chimerabellerophoncommand.h
@@ -30,6 +30,8 @@ private:
        string fastafile, outputDir;
        int processors, window, increment, numSeqs;
        Chimera* chimera;
+       vector<string> outputNames;
+       vector<string> fastaFileNames;
 };
 
 /***********************************************************/