chimeracheck method added

[mothur.git] / chimera.h

diff --git a/chimera.h b/chimera.h
index 8d7e08d50b37fb92049f52d4d9083030a6acbd5b..5df383ddcc56e62e853babb4f23e0978ce76d9c1 100644 (file)
--- a/chimera.h
+++ b/chimera.h
@@ -69,6 +69,8 @@ class Chimera {
                virtual void setIncrement(int i)                {       increment = i;          }
                virtual void setNumWanted(int n)                {       numWanted = n;          }
                virtual void setKmerSize(int k)                 {       kmerSize = k;           }
+               virtual void setSVG(int s)                              {       svg = s;                        }
+               virtual void setName(string n)                  {       name = n;                       }
                
                virtual void setCons(string){};
                virtual void setQuantiles(string){};
@@ -85,9 +87,9 @@ class Chimera {
                
        protected:
                
-               bool filter, correction;
+               bool filter, correction, svg;
                int processors, window, increment, numWanted, kmerSize;
-               string seqMask, quanfile, filterString;
+               string seqMask, quanfile, filterString, name;
                        
 
 };