working on chimeraslayer and found bug in shared command.

[mothur.git] / chimera.h

diff --git a/chimera.h b/chimera.h
index 3efe0e4b63095042de78f3938118c7ab1d642656..2d6ac0b2a7495bbf2408e38b18f52e0c0c330dcc 100644 (file)
--- a/chimera.h
+++ b/chimera.h
@@ -76,6 +76,7 @@ class Chimera {
                virtual void setDivR(float d)                   {       divR = d;                       }
                virtual void setParents(int p)                  {       parents = p;            }
                virtual void setMinSim(int s)                   {       minSim = s;                     }
+               virtual void setPrint(int p)                    {       printAll = p;           }
 
                
                virtual void setCons(string){};
@@ -93,7 +94,7 @@ class Chimera {
                
        protected:
                
-               bool filter, correction, svg;
+               bool filter, correction, svg, printAll;
                int processors, window, increment, numWanted, kmerSize, match, misMatch, minSim, parents;
                float divR;
                string seqMask, quanfile, filterString, name;