fixed some bugs found while testing 1.8

[mothur.git] / bootstrapsharedcommand.cpp

diff --git a/bootstrapsharedcommand.cpp b/bootstrapsharedcommand.cpp
index 4f4488085a8754b731ca6c742ee43f7b0dc690c4..bfd3e984f28208d37e49f22403ad59647af38e7f 100644 (file)
--- a/bootstrapsharedcommand.cpp
+++ b/bootstrapsharedcommand.cpp
@@ -452,7 +452,7 @@ void BootSharedCommand::process(SharedOrderVector* order) {
                                        //set global data to calc trees
                                        globaldata->gTree = trees[k];
                                        
-                                       string filename = getRootName(getSimpleName(globaldata->inputFileName)) + treeCalculators[k]->getName() + ".boot" + order->getLabel();
+                                       string filename = outputDir + getRootName(getSimpleName(globaldata->inputFileName)) + treeCalculators[k]->getName() + ".boot" + order->getLabel();
                                        consensus = new ConcensusCommand(filename);
                                        consensus->execute();
                                        delete consensus;