fixes while testing

[mothur.git] / bootstrapsharedcommand.cpp

diff --git a/bootstrapsharedcommand.cpp b/bootstrapsharedcommand.cpp
index 2b7232db4dd050a663c3a5b9514b59ae058e5c4c..b7d6c45e6e0179704a0e902c7960810e65df7eca 100644 (file)
--- a/bootstrapsharedcommand.cpp
+++ b/bootstrapsharedcommand.cpp
@@ -34,6 +34,7 @@ vector<string> BootSharedCommand::getValidParameters(){
 //**********************************************************************************************************************
 BootSharedCommand::BootSharedCommand(){        
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["tree"] = tempOutNames;