moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / bootstrap.cpp

diff --git a/bootstrap.cpp b/bootstrap.cpp
deleted file mode 100644 (file)
index ce261ce..0000000
--- a/bootstrap.cpp
+++ /dev/null
@@ -1,40 +0,0 @@
-/*
- *  bootstrap.cpp
- *  Dotur
- *
- *  Created by Sarah Westcott on 1/7/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "bootstrap.h"
-
-/***********************************************************************/
-
-EstOutput Bootstrap::getValues(SAbundVector* rank){
-       try {
-               //vector<double> bootData(3,0);
-               data.resize(1,0);
-               double maxRank = (double)rank->getMaxRank();
-               double sampled = rank->getNumSeqs();
-               double sobs = rank->getNumBins();
-
-               double boot = (double)sobs;
-
-               for(int i=1;i<=maxRank;i++){
-                       boot += (double)rank->get(i)*pow((1.0-(double)i/(double)sampled),sampled);
-               }
-               
-               data[0] = boot;
-               
-               if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
-       
-               return data;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "Bootstrap", "getValues");
-               exit(1);
-       }
-}
-
-/***********************************************************************/