added count.groups command and paralellized align.seqs for windows

[mothur.git] / blastdb.hpp

diff --git a/blastdb.hpp b/blastdb.hpp
index 99a99879f427efd0ea068f125bbf8b1cd003e95e..0c3ac4b4ef1d7c49e98d3b79d5b2e40f1a1fe9bb 100644 (file)
--- a/blastdb.hpp
+++ b/blastdb.hpp
@@ -18,6 +18,8 @@ class BlastDB : public Database {
 public:
        BlastDB(string, float, float, float, float, string);
        BlastDB(string);
+       BlastDB(const BlastDB& bdb) : dbFileName(bdb.dbFileName), queryFileName(bdb.queryFileName), blastFileName(bdb.blastFileName), path(bdb.path),
+                                                                       count(bdb.count), gapOpen(bdb.gapOpen), gapExtend(bdb.gapExtend), match(bdb.match), misMatch(bdb.misMatch), Database(bdb) {}
        ~BlastDB();
        
        void generateDB();