added cluster.split command

[mothur.git] / blastdb.cpp

diff --git a/blastdb.cpp b/blastdb.cpp
index b52c82e58d0bb7c441e9b9df324461b4b9a8df60..35a19f485816c87db85b71c74ca138f00595b180 100644 (file)
--- a/blastdb.cpp
+++ b/blastdb.cpp
@@ -177,55 +177,6 @@ void BlastDB::generateDB() {
                exit(1);
        }
 }
-#ifdef USE_MPI 
-/**************************************************************************************************/
-int BlastDB::MPISend(int receiver) {
-       try {
-               
-               //send gapOpen - float
-               MPI_Send(&gapOpen, 1, MPI_FLOAT, receiver, 2001, MPI_COMM_WORLD); 
-
-               //send gapExtend - float
-               MPI_Send(&gapExtend, 1, MPI_FLOAT, receiver, 2001, MPI_COMM_WORLD); 
-               
-               //send match - float
-               MPI_Send(&match, 1, MPI_FLOAT, receiver, 2001, MPI_COMM_WORLD); 
-               
-               //send mismatch - float
-               MPI_Send(&misMatch, 1, MPI_FLOAT, receiver, 2001, MPI_COMM_WORLD); 
-                                                                       
-               return 0;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "BlastDB", "MPISend");
-               exit(1);
-       }
-}
-/**************************************************************************************************/
-int BlastDB::MPIRecv(int sender) {
-       try {
-               MPI_Status status;
-               
-               //receive gapOpen - float
-               MPI_Recv(&gapOpen, 1, MPI_FLOAT, sender, 2001, MPI_COMM_WORLD, &status);
-               
-               //receive gapExtend - float
-               MPI_Recv(&gapExtend, 1, MPI_FLOAT, sender, 2001, MPI_COMM_WORLD, &status);
-                               
-               //receive match - float
-               MPI_Recv(&match, 1, MPI_FLOAT, sender, 2001, MPI_COMM_WORLD, &status);
-               
-               //receive mismatch - float
-               MPI_Recv(&misMatch, 1, MPI_FLOAT, sender, 2001, MPI_COMM_WORLD, &status);               
-               
-               return 0;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "BlastDB", "MPIRecv");
-               exit(1);
-       }
-}
-#endif 
 /**************************************************************************************************/
 
 /**************************************************************************************************/