broke apart read matrix file

[mothur.git] / binsequencecommand.h

diff --git a/binsequencecommand.h b/binsequencecommand.h
index 22847dce9b45604515c97fab55a2673813324ec2..617f5ec7ac98f17f358c383ca424ebd817cb3227 100644 (file)
--- a/binsequencecommand.h
+++ b/binsequencecommand.h
@@ -9,11 +9,12 @@
  *
  */
 
+/* The bin.seqs command outputs a .fasta file for each distance you specify appending the OTU number to each name. */
 
 #include "command.hpp"
 #include "inputdata.h"
 #include "listvector.hpp"
-#include "readmatrix.hpp"
+#include "readotu.h"
 #include "fastamap.h"
 
 
@@ -29,7 +30,7 @@ public:
 private:
        GlobalData* globaldata;
        ListVector* list;
-       ReadMatrix* read;
+       ReadOTUFile* read;
        InputData* input;
        FastaMap* fasta;
        string filename, fastafile, namesfile;