added sorted parameter to get.oturep, added error checking to chimera classes in...

[mothur.git] / bayesian.h

diff --git a/bayesian.h b/bayesian.h
index 9b93c839c9e5a4a749bf190c1bd95200fc82f272..0020962f4276c9deb2129a27b2d69974783aab82 100644 (file)
--- a/bayesian.h
+++ b/bayesian.h
@@ -18,7 +18,7 @@
 class Bayesian : public Classify {
        
 public:
-       Bayesian(string, string, string, int, int);
+       Bayesian(string, string, string, int, int, bool);
        ~Bayesian() {};
        
        string getTaxonomy(Sequence*);
@@ -36,6 +36,7 @@ private:
        vector<int> genusNodes;  //indexes in phyloTree where genus' are located
        
        int kmerSize, numKmers, confidenceThreshold;
+       bool probs;
        
        string bootstrapResults(vector<int>, int, int);
        int getMostProbableTaxonomy(vector<int>);