working on pam

[mothur.git] / anosimcommand.h

diff --git a/anosimcommand.h b/anosimcommand.h
index aad676ab17d04ef25a9f6be2faa685d3ae580fc4..6e5aba0e65980914e6c25e6e0e55fadc4b0136b9 100644 (file)
--- a/anosimcommand.h
+++ b/anosimcommand.h
@@ -25,8 +25,11 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "anosim";                                      }
        string getCommandCategory()             { return "Hypothesis Testing";          }
+    
        string getHelpString(); 
-       string getCitation() { return "Referenced: Clarke, K. R. (1993). Non-parametric multivariate analysis of changes in community structure. _Australian Journal of Ecology_ 18, 117-143. http://www.mothur.org/wiki/Anosim"; }
+    string getOutputPattern(string);   
+       string getCitation() { return "Clarke, K. R. (1993). Non-parametric multivariate analysis of changes in community structure. _Australian Journal of Ecology_ 18, 117-143.\nhttp://www.mothur.org/wiki/Anosim"; }
+       string getDescription()         { return "analysis of similarity"; }
        
        int execute();
        void help() { m->mothurOut(getHelpString()); }