added fastq to list.seqs, get.seqs and remove.seqs. fixed bug where venn command...

[mothur.git] / alignment.hpp

diff --git a/alignment.hpp b/alignment.hpp
index 9d2197f5eaa7248b9bb8490c87c804f85931d095..3a2e84de5a8e24cf744ef3544d44df9e3e5dc722 100644 (file)
--- a/alignment.hpp
+++ b/alignment.hpp
@@ -25,6 +25,7 @@ public:
        Alignment();
        virtual ~Alignment();
        virtual void align(string, string) = 0;
+    virtual void alignPrimer(string, string) {}
        
        
 //     float getAlignmentScore();