modified calculators to use doubles, added numotu and fontsize parameters to heatmap...

[mothur.git] / alignment.cpp

diff --git a/alignment.cpp b/alignment.cpp
index d543dbd38c2ef048aa1d536049e91d046a347685..235216e8e59c82be596004559445c021312acb40 100644 (file)
--- a/alignment.cpp
+++ b/alignment.cpp
@@ -21,6 +21,7 @@ Alignment::Alignment() {      /*      do nothing      */      }
 
 Alignment::Alignment(int A) : nCols(A), nRows(A) {
        try {
+ 
                m = MothurOut::getInstance();
                alignment.resize(nRows);                        //      For the Gotoh and Needleman-Wunsch we initialize the dynamic programming
                for(int i=0;i<nRows;i++){                       //      matrix by initializing a matrix that is A x A.  By default we will set A