major change to the tree class to use the count table class instead of tree map....

[mothur.git] / aligncommand.cpp

diff --git a/aligncommand.cpp b/aligncommand.cpp
index a68fbfcba365207d7847c7eeaff12d9e4a4914e2..efc8ce489e79ac5e1d17084f5e952b39590894ba 100644 (file)
--- a/aligncommand.cpp
+++ b/aligncommand.cpp
@@ -572,7 +572,6 @@ int AlignCommand::driver(linePair* filePos, string alignFName, string reportFNam
                                if (candidateSeq->getUnaligned().length() > alignment->getnRows()) {
                                        alignment->resize(candidateSeq->getUnaligned().length()+1);
                                }
-                                                               
                                Sequence temp = templateDB->findClosestSequence(candidateSeq);
                                Sequence* templateSeq = &temp;