added citation function to commands

[mothur.git] / aligncommand.cpp

diff --git a/aligncommand.cpp b/aligncommand.cpp
index a75f9d0f944947f8d941731c0322444e68d40682..95604fc4ff4f738dc780de23b01ab65d4f473fe7 100644 (file)
--- a/aligncommand.cpp
+++ b/aligncommand.cpp
@@ -103,6 +103,7 @@ AlignCommand::AlignCommand(string option)  {
        
                //allow user to run help
                if(option == "help") { help(); abort = true; calledHelp = true;}
+               else if(option == "citation") { citation(); abort = true; calledHelp = true;}
                
                else {
                        vector<string> myArray = setParameters();