final fixes for 1.7

[mothur.git] / aligncommand.cpp

diff --git a/aligncommand.cpp b/aligncommand.cpp
index 2ca450aa4f4292feb322dec9dee1108095340684..57eebb0eb096ef8cc554ba4f0eaee8f470c5b6d2 100644 (file)
--- a/aligncommand.cpp
+++ b/aligncommand.cpp
@@ -266,6 +266,7 @@ int AlignCommand::driver(linePair* line, string alignFName, string reportFName){
                        report.setCandidate(candidateSeq);
        
                        Sequence temp = templateDB->findClosestSequence(candidateSeq);
+
                        Sequence* templateSeq = &temp;
 
                        report.setTemplate(templateSeq);