added get.repseqs command, started matrix output command

[mothur.git] / Mothur.xcodeproj / project.pbxproj

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index bb172b8b13788fa2e769d50fb31c6ac54e57d578..8136cc2c71aabdc3299b84edf22545ab0d095a00 100644 (file)
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -7,9 +7,11 @@
        objects = {
 
 /* Begin PBXBuildFile section */
+               211A24EB0FC306BC00769A33 /* getrepseqscommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 211A24EA0FC306BC00769A33 /* getrepseqscommand.cpp */; };
                211C38320F961DD400FEE541 /* sharedutilities.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 211C38300F961DD400FEE541 /* sharedutilities.cpp */; };
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                21DDC01B0F97A8FE0060691C /* bootstrapsharedcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 21DDC01A0F97A8FE0060691C /* bootstrapsharedcommand.cpp */; };
+               21E859D80FC4632E005E1A48 /* matrixoutputcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 21E859D70FC4632E005E1A48 /* matrixoutputcommand.cpp */; };
                370B88070F8A4EE4005AB382 /* getoturepcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 370B88060F8A4EE4005AB382 /* getoturepcommand.cpp */; };
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                372E12960F263D5A0095CF7E /* readdistcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 372E12950F263D5A0095CF7E /* readdistcommand.cpp */; };
@@ -27,7 +29,6 @@
                373C69180FC1C8AF00137ACD /* blastdb.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 373C69160FC1C8AF00137ACD /* blastdb.cpp */; };
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                373C692B0FC1C9EB00137ACD /* nastreport.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 373C69290FC1C9EB00137ACD /* nastreport.cpp */; };
-               373C69340FC1CA9E00137ACD /* distancedb.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 373C69320FC1CA9E00137ACD /* distancedb.cpp */; };
                373C699A0FC1E63600137ACD /* boneh.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 373C69940FC1E63600137ACD /* boneh.cpp */; };
                373C699B0FC1E63600137ACD /* efron.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 373C69960FC1E63600137ACD /* efron.cpp */; };
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@@ -174,12 +175,16 @@
 /* End PBXCopyFilesBuildPhase section */
 
 /* Begin PBXFileReference section */
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+               211A24EA0FC306BC00769A33 /* getrepseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getrepseqscommand.cpp; sourceTree = "<group>"; };
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                211C38370F961E1F00FEE541 /* treegroupscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = treegroupscommand.h; sourceTree = "<group>"; };
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+               21E859D60FC4632E005E1A48 /* matrixoutputcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = matrixoutputcommand.h; sourceTree = "<group>"; };
+               21E859D70FC4632E005E1A48 /* matrixoutputcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = matrixoutputcommand.cpp; sourceTree = "<group>"; };
                370B88050F8A4EE4005AB382 /* getoturepcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getoturepcommand.h; sourceTree = "<group>"; };
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@@ -213,8 +218,6 @@
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                373C692A0FC1C9EB00137ACD /* nastreport.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = nastreport.hpp; sourceTree = "<group>"; };
-               373C69320FC1CA9E00137ACD /* distancedb.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = distancedb.cpp; sourceTree = "<group>"; };
-               373C69330FC1CA9E00137ACD /* distancedb.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = distancedb.hpp; sourceTree = "<group>"; };
                373C69940FC1E63600137ACD /* boneh.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = boneh.cpp; sourceTree = "<group>"; };
                373C69950FC1E63600137ACD /* boneh.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = boneh.h; sourceTree = "<group>"; };
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@@ -511,8 +514,6 @@
                08FB7794FE84155DC02AAC07 /* Mothur */ = {
                        isa = PBXGroup;
                        children = (
-                               EB72FE240FC1F5CA0051AC11 /* shen.cpp */,
-                               EB72FE250FC1F5CA0051AC11 /* shen.h */,
                                08FB7795FE84155DC02AAC07 /* Source */,
                                C6859E8C029090F304C91782 /* Documentation */,
                                1AB674ADFE9D54B511CA2CBB /* Products */,
@@ -724,6 +725,8 @@
                                37D9283C0F21331F001D4494 /* sharedthetan.cpp */,
                                37D9283F0F21331F001D4494 /* sharedthetayc.h */,
                                37D9283E0F21331F001D4494 /* sharedthetayc.cpp */,
+                               EB72FE250FC1F5CA0051AC11 /* shen.h */,
+                               EB72FE240FC1F5CA0051AC11 /* shen.cpp */,
                                37D928410F21331F001D4494 /* simpson.h */,
                                37D928400F21331F001D4494 /* simpson.cpp */,
                                37D928430F21331F001D4494 /* sobs.h */,
@@ -773,12 +776,16 @@
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                                370B88050F8A4EE4005AB382 /* getoturepcommand.h */,
                                370B88060F8A4EE4005AB382 /* getoturepcommand.cpp */,
+                               211A24E90FC306BC00769A33 /* getrepseqscommand.h */,
+                               211A24EA0FC306BC00769A33 /* getrepseqscommand.cpp */,
                                375873F10F7D64800040F377 /* heatmapcommand.h */,
                                375873F00F7D64800040F377 /* heatmapcommand.cpp */,
                                37D927E40F21331F001D4494 /* helpcommand.h */,
                                37D927E30F21331F001D4494 /* helpcommand.cpp */,
                                375873F40F7D648F0040F377 /* libshuffcommand.h */,
                                375873F30F7D648F0040F377 /* libshuffcommand.cpp */,
+                               21E859D60FC4632E005E1A48 /* matrixoutputcommand.h */,
+                               21E859D70FC4632E005E1A48 /* matrixoutputcommand.cpp */,
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                                375873F70F7D649C0040F377 /* nocommands.h */,
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@@ -827,8 +834,6 @@
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                                37D927D30F21331F001D4494 /* database.cpp */,
                                37D927D50F21331F001D4494 /* datavector.hpp */,
-                               373C69330FC1CA9E00137ACD /* distancedb.hpp */,
-                               373C69320FC1CA9E00137ACD /* distancedb.cpp */,
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@@ -1088,11 +1093,12 @@
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                                373C692B0FC1C9EB00137ACD /* nastreport.cpp in Sources */,
-                               373C69340FC1CA9E00137ACD /* distancedb.cpp in Sources */,
                                373C699A0FC1E63600137ACD /* boneh.cpp in Sources */,
                                373C699B0FC1E63600137ACD /* efron.cpp in Sources */,
                                373C699C0FC1E63600137ACD /* solow.cpp in Sources */,
                                EB72FE260FC1F5CA0051AC11 /* shen.cpp in Sources */,
+                               211A24EB0FC306BC00769A33 /* getrepseqscommand.cpp in Sources */,
+                               21E859D80FC4632E005E1A48 /* matrixoutputcommand.cpp in Sources */,
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                        runOnlyForDeploymentPostprocessing = 0;
                };