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A7E9B83F12D37EC400DA6239 /* splitabundcommand.cpp */,
A7E9B84212D37EC400DA6239 /* splitgroupscommand.h */,
A7E9B84112D37EC400DA6239 /* splitgroupscommand.cpp */,
+ A747EC6F181EA0E500345732 /* sracommand.h */,
+ A747EC70181EA0F900345732 /* sracommand.cpp */,
A7E9B85012D37EC400DA6239 /* subsamplecommand.h */,
A7E9B84F12D37EC400DA6239 /* subsamplecommand.cpp */,
A7E9B85812D37EC400DA6239 /* summarycommand.h */,
A7E9B7E612D37EC400DA6239 /* shannon.h */,
A7E9B7E712D37EC400DA6239 /* shannoneven.cpp */,
A7E9B7E812D37EC400DA6239 /* shannoneven.h */,
+ A7A09B0E18773BF700FAA081 /* shannonrange.h */,
+ A7A09B0F18773C0E00FAA081 /* shannonrange.cpp */,
A7E9B7E912D37EC400DA6239 /* sharedace.cpp */,
+ A7E9B7F412D37EC400DA6239 /* sharedjabund.cpp */,
A7E9B7EA12D37EC400DA6239 /* sharedace.h */,
A7E9B7EC12D37EC400DA6239 /* sharedanderbergs.cpp */,
A7E9B7ED12D37EC400DA6239 /* sharedanderbergs.h */,
A7E9B7EF12D37EC400DA6239 /* sharedbraycurtis.h */,
A7E9B7F012D37EC400DA6239 /* sharedchao1.cpp */,
A7E9B7F112D37EC400DA6239 /* sharedchao1.h */,
- A7E9B7F412D37EC400DA6239 /* sharedjabund.cpp */,
A7E9B7F512D37EC400DA6239 /* sharedjabund.h */,
A7E9B7F612D37EC400DA6239 /* sharedjackknife.cpp */,
A7E9B7F712D37EC400DA6239 /* sharedjackknife.h */,
A7E9B7F912D37EC400DA6239 /* sharedjclass.h */,
A7E9B7FA12D37EC400DA6239 /* sharedjest.cpp */,
A7E9B7FB12D37EC400DA6239 /* sharedjest.h */,
+ A7222D711856276C0055A993 /* sharedjsd.h */,
+ A7222D721856277C0055A993 /* sharedjsd.cpp */,
+ 483C952C188F0C960035E7B7 /* sharedrjsd.h */,
+ 483C952D188F0CAD0035E7B7 /* sharedrjsd.cpp */,
A7E9B7FC12D37EC400DA6239 /* sharedkstest.cpp */,
A7E9B7FD12D37EC400DA6239 /* sharedkstest.h */,
A7E9B7FE12D37EC400DA6239 /* sharedkulczynski.cpp */,
A7E9B6BD12D37EC400DA6239 /* database.cpp */,
A7E9B6BE12D37EC400DA6239 /* database.hpp */,
A7E9B6BF12D37EC400DA6239 /* datavector.hpp */,
+ A77916E7176F7F7600EEFE18 /* designmap.h */,
+ A77916E6176F7F7600EEFE18 /* designmap.cpp */,
A7E9B6CE12D37EC400DA6239 /* distancedb.hpp */,
A7E9B6CD12D37EC400DA6239 /* distancedb.cpp */,
A7E9B6DE12D37EC400DA6239 /* fastamap.cpp */,
A7E9B89712D37EC400DA6239 /* chimerabellerophoncommand.cpp in Sources */,
A7E9B89812D37EC400DA6239 /* chimeraccodecommand.cpp in Sources */,
A7E9B89912D37EC400DA6239 /* chimeracheckcommand.cpp in Sources */,
+ 48E981CF189C38FB0042BE9D /* mergesfffilecommand.cpp in Sources */,
A7E9B89A12D37EC400DA6239 /* chimeracheckrdp.cpp in Sources */,
A7E9B89B12D37EC400DA6239 /* chimerapintailcommand.cpp in Sources */,
A7E9B89C12D37EC400DA6239 /* chimerarealigner.cpp in Sources */,
A7E9B94112D37EC400DA6239 /* setlogfilecommand.cpp in Sources */,
A7E9B94212D37EC400DA6239 /* sffinfocommand.cpp in Sources */,
A7E9B94312D37EC400DA6239 /* shannon.cpp in Sources */,
+ 483C952E188F0CAD0035E7B7 /* sharedrjsd.cpp in Sources */,
A7E9B94412D37EC400DA6239 /* shannoneven.cpp in Sources */,
A7E9B94512D37EC400DA6239 /* sharedace.cpp in Sources */,
A7E9B94612D37EC400DA6239 /* sharedanderbergs.cpp in Sources */,
A7E0243D15B4520A00A5F046 /* sparsedistancematrix.cpp in Sources */,
A741FAD215D1688E0067BCC5 /* sequencecountparser.cpp in Sources */,
A7C7DAB915DA758B0059B0CF /* sffmultiplecommand.cpp in Sources */,
- A7386C231619CCE600651424 /* classifysharedcommand.cpp in Sources */,
A7386C251619E52300651424 /* abstractdecisiontree.cpp in Sources */,
A7386C29161A110800651424 /* decisiontree.cpp in Sources */,
A77E1938161B201E00DB1A2A /* randomforest.cpp in Sources */,
A77B718B173D40E5002163C2 /* calcsparcc.cpp in Sources */,
A7E6F69E17427D06006775E2 /* makelookupcommand.cpp in Sources */,
A7CFA4311755401800D9ED4D /* renameseqscommand.cpp in Sources */,
+ A741744C175CD9B1007DF49B /* makelefsecommand.cpp in Sources */,
+ A7190B221768E0DF00A9AFA6 /* lefsecommand.cpp in Sources */,
+ A77916E8176F7F7600EEFE18 /* designmap.cpp in Sources */,
+ A7D9378A17B146B5001E90B0 /* wilcox.cpp in Sources */,
+ A7F24FC317EA36600021DC9A /* classifyrfsharedcommand.cpp in Sources */,
+ A747EC71181EA0F900345732 /* sracommand.cpp in Sources */,
+ A7132EB3184E792700AAA402 /* communitytype.cpp in Sources */,
+ A7D395C4184FA3A200A350D7 /* kmeans.cpp in Sources */,
+ A7222D731856277C0055A993 /* sharedjsd.cpp in Sources */,
+ A7B093C018579F0400843CD1 /* pam.cpp in Sources */,
+ A7A09B1018773C0E00FAA081 /* shannonrange.cpp in Sources */,
);
runOnlyForDeploymentPostprocessing = 0;
};
"DSTROOT[sdk=*]" = TARGET_BUILD_DIR;
GCC_DYNAMIC_NO_PIC = NO;
GCC_MODEL_TUNING = G5;
- GCC_OPTIMIZATION_LEVEL = 3;
+ GCC_OPTIMIZATION_LEVEL = 0;
"INSTALL_PATH[sdk=*]" = TARGET_BUILD_DIR;
PRODUCT_NAME = mothur;
- SDKROOT = macosx10.8;
+ SDKROOT = macosx;
SKIP_INSTALL = NO;
};
name = Debug;
DEPLOYMENT_LOCATION = YES;
DSTROOT = TARGET_BUILD_DIR;
GCC_MODEL_TUNING = G5;
- GCC_OPTIMIZATION_LEVEL = 3;
+ GCC_OPTIMIZATION_LEVEL = 0;
GCC_WARN_UNUSED_VALUE = YES;
PRODUCT_NAME = mothur;
SDKROOT = macosx;
GCC_ENABLE_SSE3_EXTENSIONS = NO;
GCC_ENABLE_SSE41_EXTENSIONS = NO;
GCC_ENABLE_SSE42_EXTENSIONS = NO;
- GCC_OPTIMIZATION_LEVEL = s;
+ GCC_OPTIMIZATION_LEVEL = 3;
GCC_PREPROCESSOR_DEFINITIONS = (
- "MOTHUR_FILES=\"\\\"../../release\\\"\"",
- "VERSION=\"\\\"1.31.0\\\"\"",
- "RELEASE_DATE=\"\\\"5/24/2013\\\"\"",
+ "MOTHUR_FILES=\"\\\"/Users/sarahwestcott/desktop/release\\\"\"",
+ "VERSION=\"\\\"1.33.0\\\"\"",
+ "RELEASE_DATE=\"\\\"2/7/2014\\\"\"",
);
+ GCC_VERSION = "";
"GCC_VERSION[arch=*]" = "";
GCC_WARN_ABOUT_MISSING_NEWLINE = YES;
GCC_WARN_ABOUT_RETURN_TYPE = YES;
"-lncurses",
"-lreadline",
);
- SDKROOT = macosx;
+ SDKROOT = macosx10.8;
SKIP_INSTALL = NO;
USER_HEADER_SEARCH_PATHS = "";
};
GCC_C_LANGUAGE_STANDARD = gnu99;
GCC_GENERATE_DEBUGGING_SYMBOLS = NO;
GCC_MODEL_TUNING = "";
- GCC_OPTIMIZATION_LEVEL = s;
+ GCC_OPTIMIZATION_LEVEL = 3;
GCC_PREPROCESSOR_DEFINITIONS = (
- "VERSION=\"\\\"1.31.0\\\"\"",
- "RELEASE_DATE=\"\\\"5/24/2013\\\"\"",
+ "VERSION=\"\\\"1.32.1\\\"\"",
+ "RELEASE_DATE=\"\\\"10/16/2013\\\"\"",
);
+ GCC_VERSION = "";
GCC_WARN_ABOUT_MISSING_NEWLINE = YES;
GCC_WARN_ABOUT_RETURN_TYPE = YES;
GCC_WARN_MISSING_PARENTHESES = YES;
"-lncurses",
"-lreadline",
);
- SDKROOT = macosx;
+ SDKROOT = macosx10.8;
SKIP_INSTALL = NO;
};
name = Release;
projects / mothur.git / blobdiff