continued work on chimeras and fixed bug in trim.seqs and reverse.seqs that was due...

[mothur.git] / Mothur.xcodeproj / project.pbxproj

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index 75ef0d57dda26943c7a2da0c295369cd501c8ed1..6aa6b2774a80080173293dc3af259e01952f1d49 100644 (file)
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -162,7 +162,7 @@
                A70B53AA0F4CD7AD0064797E /* getgroupcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A70B53A40F4CD7AD0064797E /* getgroupcommand.cpp */; };
                A70B53AB0F4CD7AD0064797E /* getlabelcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A70B53A60F4CD7AD0064797E /* getlabelcommand.cpp */; };
                A70B53AC0F4CD7AD0064797E /* getlinecommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A70B53A80F4CD7AD0064797E /* getlinecommand.cpp */; };
-               A75B887D104C16860083C454 /* alignedsimilarity.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A75B8879104C16860083C454 /* alignedsimilarity.cpp */; };
+               A7283FF81056CAE100D0CC69 /* chimeracheckrdp.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7283FF71056CAE100D0CC69 /* chimeracheckrdp.cpp */; };
                A75B887E104C16860083C454 /* ccode.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A75B887B104C16860083C454 /* ccode.cpp */; };
                EB1216880F619B83004A865F /* bergerparker.cpp in Sources */ = {isa = PBXBuildFile; fileRef = EB1216870F619B83004A865F /* bergerparker.cpp */; };
                EB1216E50F61ACFB004A865F /* bstick.cpp in Sources */ = {isa = PBXBuildFile; fileRef = EB1216E40F61ACFB004A865F /* bstick.cpp */; };
@@ -515,8 +515,8 @@
                A70B53A70F4CD7AD0064797E /* getlabelcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getlabelcommand.h; sourceTree = SOURCE_ROOT; };
                A70B53A80F4CD7AD0064797E /* getlinecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getlinecommand.cpp; sourceTree = SOURCE_ROOT; };
                A70B53A90F4CD7AD0064797E /* getlinecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getlinecommand.h; sourceTree = SOURCE_ROOT; };
-               A75B8879104C16860083C454 /* alignedsimilarity.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = alignedsimilarity.cpp; sourceTree = SOURCE_ROOT; };
-               A75B887A104C16860083C454 /* alignedsimilarity.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = alignedsimilarity.h; sourceTree = SOURCE_ROOT; };
+               A7283FF61056CAE100D0CC69 /* chimeracheckrdp.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = chimeracheckrdp.h; sourceTree = "<group>"; };
+               A7283FF71056CAE100D0CC69 /* chimeracheckrdp.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = chimeracheckrdp.cpp; sourceTree = "<group>"; };
                A75B887B104C16860083C454 /* ccode.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = ccode.cpp; sourceTree = SOURCE_ROOT; };
                A75B887C104C16860083C454 /* ccode.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = ccode.h; sourceTree = SOURCE_ROOT; };
                C6859E8B029090EE04C91782 /* Mothur.1 */ = {isa = PBXFileReference; lastKnownFileType = text.man; path = Mothur.1; sourceTree = "<group>"; };
@@ -649,12 +649,12 @@
                        children = (
                                374F2FD51006320200E97C66 /* chimera.h */,
                                372095C1103196D70004D347 /* chimera.cpp */,
-                               A75B887A104C16860083C454 /* alignedsimilarity.h */,
-                               A75B8879104C16860083C454 /* alignedsimilarity.cpp */,
                                374F2FE9100634B600E97C66 /* bellerophon.h */,
                                374F2FEA100634B600E97C66 /* bellerophon.cpp */,
                                A75B887C104C16860083C454 /* ccode.h */,
                                A75B887B104C16860083C454 /* ccode.cpp */,
+                               A7283FF61056CAE100D0CC69 /* chimeracheckrdp.h */,
+                               A7283FF71056CAE100D0CC69 /* chimeracheckrdp.cpp */,
                                372A55531017922B00C5194B /* decalc.h */,
                                372A55541017922B00C5194B /* decalc.cpp */,
                                374F301110063B6F00E97C66 /* pintail.h */,
@@ -1177,8 +1177,8 @@
                                374F301310063B6F00E97C66 /* pintail.cpp in Sources */,
                                372A55551017922B00C5194B /* decalc.cpp in Sources */,
                                372095C2103196D70004D347 /* chimera.cpp in Sources */,
-                               A75B887D104C16860083C454 /* alignedsimilarity.cpp in Sources */,
                                A75B887E104C16860083C454 /* ccode.cpp in Sources */,
+                               A7283FF81056CAE100D0CC69 /* chimeracheckrdp.cpp in Sources */,
                        );
                        runOnlyForDeploymentPostprocessing = 0;
                };