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A7E9B6B212D37EC400DA6239 /* commandoptionparser.hpp */,
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A7E9B65212D37EC300DA6239 /* aligncommand.h */,
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A71CB15F130B04A2001E7287 /* anosimcommand.h */,
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A7E9B66112D37EC300DA6239 /* binsequencecommand.h */,
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A7E9B66B12D37EC400DA6239 /* bootstrapsharedcommand.h */,
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A7E9B67312D37EC400DA6239 /* catchallcommand.h */,
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A7E9B67B12D37EC400DA6239 /* chimerabellerophoncommand.h */,
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A7E9B67D12D37EC400DA6239 /* chimeraccodecommand.h */,
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A7E9B67F12D37EC400DA6239 /* chimeracheckcommand.h */,
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A7E9B68B12D37EC400DA6239 /* chimeraslayercommand.h */,
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A7E9B68D12D37EC400DA6239 /* chopseqscommand.h */,
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A7E9B69112D37EC400DA6239 /* classifyotucommand.h */,
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A7E9B69312D37EC400DA6239 /* classifyseqscommand.h */,
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A7E9B69712D37EC400DA6239 /* clearcutcommand.h */,
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A7E9B69D12D37EC400DA6239 /* clustercommand.h */,
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A7E9B69F12D37EC400DA6239 /* clusterdoturcommand.h */,
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A7E9B6A112D37EC400DA6239 /* clusterfragmentscommand.h */,
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A7E9B6A312D37EC400DA6239 /* clustersplitcommand.h */,
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A7E9B6A912D37EC400DA6239 /* collectcommand.h */,
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A7E9B6AD12D37EC400DA6239 /* collectsharedcommand.h */,
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A7E9B6B612D37EC400DA6239 /* consensuscommand.h */,
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A7E9B6B812D37EC400DA6239 /* consensusseqscommand.h */,
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A7E9B6BA12D37EC400DA6239 /* corraxescommand.h */,
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A7E9B6C412D37EC400DA6239 /* deconvolutecommand.h */,
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A7E9B6C612D37EC400DA6239 /* degapseqscommand.h */,
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A7E9B6C812D37EC400DA6239 /* deuniqueseqscommand.h */,
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A7E9B6CC12D37EC400DA6239 /* distancecommand.h */,
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A7E9B6E412D37EC400DA6239 /* filterseqscommand.h */,
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A7FE7C3E1330EA1000F7B327 /* getcurrentcommand.h */,
A7FE7C3F1330EA1000F7B327 /* getcurrentcommand.cpp */,
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A7E9B6F312D37EC400DA6239 /* getgroupcommand.h */,
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A7E9B6F512D37EC400DA6239 /* getgroupscommand.h */,
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A7E9B6F712D37EC400DA6239 /* getlabelcommand.h */,
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A7E9B6F912D37EC400DA6239 /* getlineagecommand.h */,
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A7E9B6FB12D37EC400DA6239 /* getlistcountcommand.h */,
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A7E9B6FF12D37EC400DA6239 /* getoturepcommand.h */,
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A7E9B70112D37EC400DA6239 /* getotuscommand.h */,
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A7E9B70312D37EC400DA6239 /* getrabundcommand.h */,
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A7E9B70512D37EC400DA6239 /* getrelabundcommand.h */,
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A7E9B70712D37EC400DA6239 /* getsabundcommand.h */,
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A7E9B70912D37EC400DA6239 /* getseqscommand.h */,
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A7E9B70B12D37EC400DA6239 /* getsharedotucommand.h */,
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A7E9B71B12D37EC400DA6239 /* hclustercommand.h */,
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A7E9B71F12D37EC400DA6239 /* heatmapcommand.h */,
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A7E9B72312D37EC400DA6239 /* heatmapsimcommand.h */,
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A7E9B72912D37EC400DA6239 /* helpcommand.h */,
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A75790571301749D00A30DAB /* homovacommand.h */,
A75790581301749D00A30DAB /* homovacommand.cpp */,
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A7E9B72C12D37EC400DA6239 /* indicatorcommand.h */,
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A7E9B73C12D37EC400DA6239 /* libshuffcommand.h */,
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A7E9B73E12D37EC400DA6239 /* listseqscommand.h */,
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A7FA10001302E096003860FE /* mantelcommand.h */,
A7FA10011302E096003860FE /* mantelcommand.cpp */,
A799F5B71309A3E000AEEFA0 /* makefastqcommand.h */,
A799F5B81309A3E000AEEFA0 /* makefastqcommand.cpp */,
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A7E9B74412D37EC400DA6239 /* makegroupcommand.h */,
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A7E9B74A12D37EC400DA6239 /* matrixoutputcommand.h */,
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A7E9B75412D37EC400DA6239 /* mergefilecommand.h */,
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A71FE12A12EDF72400963CA7 /* mergegroupscommand.h */,
A71FE12B12EDF72400963CA7 /* mergegroupscommand.cpp */,
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A7E9B75812D37EC400DA6239 /* metastatscommand.h */,
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A7E9B75A12D37EC400DA6239 /* mgclustercommand.h */,
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A7E9B76912D37EC400DA6239 /* nocommands.cpp */,
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A7E9B76C12D37EC400DA6239 /* normalizesharedcommand.h */,
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A713EBEB12DC7C5E000092AC /* nmdscommand.h */,
A713EBEC12DC7C5E000092AC /* nmdscommand.cpp */,
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A7E9B77A12D37EC400DA6239 /* otuhierarchycommand.h */,
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A7E9B77E12D37EC400DA6239 /* pairwiseseqscommand.h */,
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A7E9B78012D37EC400DA6239 /* parsefastaqcommand.h */,
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A7E9B78212D37EC400DA6239 /* parselistscommand.h */,
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A7E9B78612D37EC400DA6239 /* parsimonycommand.h */,
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A7FC486512D795D60055BC5C /* pcacommand.h */,
A7FC486612D795D60055BC5C /* pcacommand.cpp */,
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A7E9B78812D37EC400DA6239 /* pcoacommand.h */,
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A7E9B78C12D37EC400DA6239 /* phylodiversitycommand.h */,
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A7E9B79212D37EC400DA6239 /* phylotypecommand.h */,
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A7E9B79612D37EC400DA6239 /* pipelinepdscommand.h */,
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A7E9B79812D37EC400DA6239 /* preclustercommand.h */,
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A7E9B7A212D37EC400DA6239 /* quitcommand.h */,
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A7E9B7AC12D37EC400DA6239 /* rarefactcommand.h */,
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A7E9B7AF12D37EC400DA6239 /* rarefactsharedcommand.h */,
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A7E9B7B712D37EC400DA6239 /* readdistcommand.h */,
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A7E9B7BC12D37EC400DA6239 /* readotucommand.h */,
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A7E9B7C212D37EC400DA6239 /* readtreecommand.h */,
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A7E9B7C412D37EC400DA6239 /* removegroupscommand.h */,
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A7E9B7C612D37EC400DA6239 /* removelineagecommand.h */,
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A7E9B7C812D37EC400DA6239 /* removeotuscommand.h */,
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A727864212E9E28C00F86ABA /* removerarecommand.h */,
A727864312E9E28C00F86ABA /* removerarecommand.cpp */,
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A7E9B7CA12D37EC400DA6239 /* removeseqscommand.h */,
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A7E9B7CE12D37EC400DA6239 /* reversecommand.h */,
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A7E9B7D212D37EC400DA6239 /* screenseqscommand.h */,
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A7E9B7D412D37EC400DA6239 /* secondarystructurecommand.h */,
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A7E9B7D612D37EC400DA6239 /* sensspeccommand.h */,
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A7E9B7D812D37EC400DA6239 /* seqerrorcommand.h */,
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A7E9B7DA12D37EC400DA6239 /* seqsummarycommand.h */,
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A7FE7E6B13311EA400F7B327 /* setcurrentcommand.h */,
A7FE7E6C13311EA400F7B327 /* setcurrentcommand.cpp */,
- A7E9B7DF12D37EC400DA6239 /* setdircommand.cpp */,
A7E9B7E012D37EC400DA6239 /* setdircommand.h */,
- A7E9B7E112D37EC400DA6239 /* setlogfilecommand.cpp */,
+ A7E9B7DF12D37EC400DA6239 /* setdircommand.cpp */,
A7E9B7E212D37EC400DA6239 /* setlogfilecommand.h */,
- A7E9B7E312D37EC400DA6239 /* sffinfocommand.cpp */,
+ A7E9B7E112D37EC400DA6239 /* setlogfilecommand.cpp */,
A7E9B7E412D37EC400DA6239 /* sffinfocommand.h */,
- A7E9B7F212D37EC400DA6239 /* sharedcommand.cpp */,
+ A7E9B7E312D37EC400DA6239 /* sffinfocommand.cpp */,
A7E9B7F312D37EC400DA6239 /* sharedcommand.h */,
- A7E9B82712D37EC400DA6239 /* shhhercommand.cpp */,
+ A7E9B7F212D37EC400DA6239 /* sharedcommand.cpp */,
A7E9B82812D37EC400DA6239 /* shhhercommand.h */,
- A7E9B83F12D37EC400DA6239 /* splitabundcommand.cpp */,
+ A7E9B82712D37EC400DA6239 /* shhhercommand.cpp */,
A7E9B84012D37EC400DA6239 /* splitabundcommand.h */,
- A7E9B84112D37EC400DA6239 /* splitgroupscommand.cpp */,
+ A7E9B83F12D37EC400DA6239 /* splitabundcommand.cpp */,
A7E9B84212D37EC400DA6239 /* splitgroupscommand.h */,
- A7E9B84F12D37EC400DA6239 /* subsamplecommand.cpp */,
+ A7E9B84112D37EC400DA6239 /* splitgroupscommand.cpp */,
A7E9B85012D37EC400DA6239 /* subsamplecommand.h */,
- A7E9B85712D37EC400DA6239 /* summarycommand.cpp */,
+ A7E9B84F12D37EC400DA6239 /* subsamplecommand.cpp */,
A7E9B85812D37EC400DA6239 /* summarycommand.h */,
- A7E9B85912D37EC400DA6239 /* summarysharedcommand.cpp */,
+ A7E9B85712D37EC400DA6239 /* summarycommand.cpp */,
A7E9B85A12D37EC400DA6239 /* summarysharedcommand.h */,
- A7E9B85B12D37EC400DA6239 /* systemcommand.cpp */,
+ A7E9B85912D37EC400DA6239 /* summarysharedcommand.cpp */,
A7E9B85C12D37EC400DA6239 /* systemcommand.h */,
- A7E9B86212D37EC400DA6239 /* treegroupscommand.cpp */,
+ A7E9B85B12D37EC400DA6239 /* systemcommand.cpp */,
A7E9B86312D37EC400DA6239 /* treegroupscommand.h */,
- A7E9B86812D37EC400DA6239 /* trimflowscommand.cpp */,
+ A7E9B86212D37EC400DA6239 /* treegroupscommand.cpp */,
A7E9B86912D37EC400DA6239 /* trimflowscommand.h */,
- A7E9B86A12D37EC400DA6239 /* trimseqscommand.cpp */,
+ A7E9B86812D37EC400DA6239 /* trimflowscommand.cpp */,
A7E9B86B12D37EC400DA6239 /* trimseqscommand.h */,
- A7E9B86C12D37EC400DA6239 /* unifracunweightedcommand.cpp */,
+ A7E9B86A12D37EC400DA6239 /* trimseqscommand.cpp */,
A7E9B86D12D37EC400DA6239 /* unifracunweightedcommand.h */,
- A7E9B86E12D37EC400DA6239 /* unifracweightedcommand.cpp */,
+ A7E9B86C12D37EC400DA6239 /* unifracunweightedcommand.cpp */,
A7E9B86F12D37EC400DA6239 /* unifracweightedcommand.h */,
- A7E9B87A12D37EC400DA6239 /* venncommand.cpp */,
+ A7E9B86E12D37EC400DA6239 /* unifracweightedcommand.cpp */,
A7E9B87B12D37EC400DA6239 /* venncommand.h */,
+ A7E9B87A12D37EC400DA6239 /* venncommand.cpp */,
);
name = commands;
sourceTree = "<group>";
A7E9B84D12D37EC400DA6239 /* structpearson.cpp */,
A7E9B84E12D37EC400DA6239 /* structpearson.h */,
A7E9B86112D37EC400DA6239 /* treecalculator.h */,
- A7E9B87012D37EC400DA6239 /* unweighted.cpp */,
A7E9B87112D37EC400DA6239 /* unweighted.h */,
+ A7E9B87012D37EC400DA6239 /* unweighted.cpp */,
A7E9B87212D37EC400DA6239 /* uvest.cpp */,
A7E9B87312D37EC400DA6239 /* uvest.h */,
- A7E9B87C12D37EC400DA6239 /* weighted.cpp */,
A7E9B87D12D37EC400DA6239 /* weighted.h */,
+ A7E9B87C12D37EC400DA6239 /* weighted.cpp */,
A7E9B87F12D37EC400DA6239 /* whittaker.cpp */,
A7E9B88012D37EC400DA6239 /* whittaker.h */,
);
A7E9B7DE12D37EC400DA6239 /* sequencedb.h */,
A7E9B80412D37EC400DA6239 /* sharedlistvector.cpp */,
A7E9B80512D37EC400DA6239 /* sharedlistvector.h */,
- A7E9B80D12D37EC400DA6239 /* sharedordervector.cpp */,
A7E9B80E12D37EC400DA6239 /* sharedordervector.h */,
+ A7E9B80D12D37EC400DA6239 /* sharedordervector.cpp */,
A7E9B80F12D37EC400DA6239 /* sharedrabundfloatvector.cpp */,
A7E9B81012D37EC400DA6239 /* sharedrabundfloatvector.h */,
A7E9B81112D37EC400DA6239 /* sharedrabundvector.cpp */,
A7E9B7B412D37EC400DA6239 /* readcolumn.cpp */,
A7E9B7B512D37EC400DA6239 /* readcolumn.h */,
A7E9B7B812D37EC400DA6239 /* readmatrix.hpp */,
- A7E9B7B912D37EC400DA6239 /* readotu.cpp */,
A7E9B7BA12D37EC400DA6239 /* readotu.h */,
+ A7E9B7B912D37EC400DA6239 /* readotu.cpp */,
A7E9B7BD12D37EC400DA6239 /* readphylip.cpp */,
A7E9B7BE12D37EC400DA6239 /* readphylip.h */,
A7E9B7BF12D37EC400DA6239 /* readtree.cpp */,
A7E9B89A12D37EC400DA6239 /* chimeracheckrdp.cpp in Sources */,
A7E9B89B12D37EC400DA6239 /* chimerapintailcommand.cpp in Sources */,
A7E9B89C12D37EC400DA6239 /* chimerarealigner.cpp in Sources */,
- A7E9B89D12D37EC400DA6239 /* chimeraseqscommand.cpp in Sources */,
A7E9B89E12D37EC400DA6239 /* chimeraslayer.cpp in Sources */,
A7E9B89F12D37EC400DA6239 /* chimeraslayercommand.cpp in Sources */,
A7E9B8A012D37EC400DA6239 /* chopseqscommand.cpp in Sources */,
projects / mothur.git / blobdiff