readseqsphylip.h

   1 #ifndef READPHYLIP_H
   2 #define READPHYLIP_H
   3
   4 /*
   5  *  readphylip.h
   6  *  Mothur
   7  *
   8  *  Created by Thomas Ryabin on 4/24/09.
   9  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  10  *
  11  */
  12 using namespace std;
  13
  14 #include "readseqs.h"
  15 #include "globaldata.hpp"
  16 #include "sequencedb.h"
  17 #include "mothur.h"
  18
  19 /**********************************************************************************/
  20
  21 class ReadPhylip : public ReadSeqs {
  22
  23         public:
  24                 ReadPhylip(string);
  25                 ~ReadPhylip();
  26                 void read();
  27                 SequenceDB* getDB();
  28
  29         private:
  30                 bool isSeq(string);
  31 };
  32
  33 #endif