7 * Created by westcott on 10/28/09.
8 * Copyright 2009 Schloss Lab. All rights reserved.
14 #include "nameassignment.hpp"
15 #include "listvector.hpp"
16 #include "globaldata.hpp"
19 /******************************************************/
24 ReadCluster(string, float);
26 void read(NameAssignment*);
27 string getOutputFile() { return OutPutFile; }
28 void setFormat(string f) { format = f; }
29 ListVector* getListVector() { return list; }
30 //NameAssignment* getNameMap() { return nameMap; }
33 GlobalData* globaldata;
35 string OutPutFile, format;
38 //NameAssignment* nameMap;
40 void createHClusterFile();
41 void convertPhylip2Column(NameAssignment*);
44 /******************************************************/