1 #ifndef FILTERSEQSCOMMAND_H
2 #define FILTERSEQSCOMMAND_H
8 * Created by Thomas Ryabin on 5/4/09.
9 * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
13 #include "command.hpp"
14 #include "globaldata.hpp"
15 #include "readfasta.h"
16 #include "readnexus.h"
17 #include "readclustal.h"
18 #include "readseqsphylip.h"
21 class FilterSeqsCommand : public Command {
25 ~FilterSeqsCommand() {};
30 void doTrump(Sequence);
33 void getFreqs(Sequence);
42 GlobalData* globaldata;
43 vector<int> a, t, g, c, gap;