update everything again

[function2gene.git] / bin / parse_harvester_results

diff --git a/bin/parse_harvester_results b/bin/parse_harvester_results
index a35c9b902f5a9ff840d6bb3450862ae0989cd9e1..7a8cfd4a3ef37b40e7d63c36424d2e34c81ae59d 100755 (executable)
--- a/bin/parse_harvester_results
+++ b/bin/parse_harvester_results
@@ -80,7 +80,9 @@ my %options = (debug    => 0,
               keywords => 0,
              );
 
-GetOptions(\%options,'keyword|k=s','dir|D=s','debug|d+','help|h|?','man|m');
+GetOptions(\%options,'keyword|k=s','dir|D=s','debug|d+','help|h|?','man|m',
+          'keywords',
+         );
 
 
 pod2usage() if $options{help};
@@ -104,7 +106,7 @@ if ($options{keywords}) {
      if (@ARGV != 1) {
          pod2usage("If the --keywords option is used, exactly one argument (the keyword) must be passed");
      }
-     $option{dir} = "$ARGV[0]_results_harvester";
+     $options{dir} = "$ARGV[0]_results_harvester";
 }