X-Git-Url: https://git.donarmstrong.com/?p=function2gene.git;a=blobdiff_plain;f=bin%2Fparse_harvester_results;h=7a8cfd4a3ef37b40e7d63c36424d2e34c81ae59d;hp=a35c9b902f5a9ff840d6bb3450862ae0989cd9e1;hb=dd8ec1d4cecf282940831171ef0f796570d781fd;hpb=59bb41e2cadc989c299822191d8e8ee7d348779c

diff --git a/bin/parse_harvester_results b/bin/parse_harvester_results
index a35c9b9..7a8cfd4 100755
--- a/bin/parse_harvester_results
+++ b/bin/parse_harvester_results
@@ -80,7 +80,9 @@ my %options = (debug    => 0,
 	       keywords => 0,
 	      );
 
-GetOptions(\%options,'keyword|k=s','dir|D=s','debug|d+','help|h|?','man|m');
+GetOptions(\%options,'keyword|k=s','dir|D=s','debug|d+','help|h|?','man|m',
+	   'keywords',
+	  );
 
 
 pod2usage() if $options{help};
@@ -104,7 +106,7 @@ if ($options{keywords}) {
      if (@ARGV != 1) {
 	  pod2usage("If the --keywords option is used, exactly one argument (the keyword) must be passed");
      }
-     $option{dir} = "$ARGV[0]_results_harvester";
+     $options{dir} = "$ARGV[0]_results_harvester";
 }