fastq-grep works

[fastq-tools.git] / src / kseq.h

diff --git a/src/kseq.h b/src/kseq.h
index bbe012552ff3b2ac047ddd10655e80827bbb4008..4fafd8546408269ca1f794de3e759e0218256e0b 100644 (file)
--- a/src/kseq.h
+++ b/src/kseq.h
@@ -197,7 +197,7 @@ typedef struct __kstring_t {
                        seq->qual.m = seq->seq.m;                                                                       \
                        seq->qual.s = (char*)realloc(seq->qual.s, seq->qual.m);         \
                }                                                                                                                               \
-               while ((c = ks_getc(ks)) != -1 && c != '\n'); /* skip the rest of '+' line */ \
+        ks_getuntil(ks, '\n', &seq->comment, &c);                        \
                if (c == -1) return -2; /* we should not stop here */                   \
                while ((c = ks_getc(ks)) != -1 && seq->qual.l < seq->seq.l)             \
                        if (c >= 33 && c <= 127) seq->qual.s[seq->qual.l++] = (unsigned char)c; \