a program to print smith-waterman scores against a query sequence

[fastq-tools.git] / src / fastq-kmers.c

diff --git a/src/fastq-kmers.c b/src/fastq-kmers.c
index 551ff88a51249ee9aaf6277ed564eefe7eb21d33..43fa3026b8bf02919cced34663fc14fc4999d066 100644 (file)
--- a/src/fastq-kmers.c
+++ b/src/fastq-kmers.c
@@ -144,6 +144,9 @@ void print_kmer_freqs(FILE* fout, uint32_t* cs)
 
 int main(int argc, char* argv[])
 {
+    SET_BINARY_MODE(stdin);
+    SET_BINARY_MODE(stdout);
+
     help_flag = 0;
     k = 1;