Fix the weird output behavior of fastq-sample.

[fastq-tools.git] / src / Makefile.am

diff --git a/src/Makefile.am b/src/Makefile.am
index e28add9e4424a0a95ecc08f4d5257a32dc6c7ac4..aeb9c85f6a2df5288462021a6613c246b65b6f0d 100644 (file)
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -1,17 +1,23 @@
 
-bin_PROGRAMS = fastq-grep fastq-kmers fastq-match
+bin_PROGRAMS = fastq-grep fastq-kmers fastq-match fastq-uniq fastq-qual fastq-sample fastq-qualadj
 
-fastq_common_src=fastq-common.h fastq-common.c
-fastq_parse_src=fastq-parse.h fastq-parse.c
-fastq_sw_src=fastq-sw.h fastq-sw.c
+fastq_common_src=common.h common.c
+fastq_parse_src=parse.h parse.c
+fastq_sw_src=sw.h sw.c
+fastq_hash_src=hash.h hash.c
+fastq_rng_src=rng.h rng.c
 
 fastq_grep_SOURCES = fastq-grep.c $(fastq_common_src) $(fastq_parse_src)
-fastq_grep_LDADD = $(PCRE_LIBS) -lz
+fastq_grep_LDADD = $(PCRE_LIBS)
 
 fastq_kmers_SOURCES = fastq-kmers.c $(fastq_common_src) $(fastq_parse_src)
-fastq_kmers_LDADD = -lz
 
 fastq_match_SOURCES = fastq-match.c $(fastq_common_src) $(fastq_parse_src) $(fastq_sw_src)
-fastq_match_LDADD   = -lz
 
+fastq_uniq_SOURCES = fastq-uniq.c $(fastq_common_src) $(fastq_parse_src) $(fastq_hash_src)
 
+fastq_qual_SOURCES = fastq-qual.c $(fastq_common_src) $(fastq_parse_src)
+
+fastq_sample_SOURCES = fastq-sample.c $(fastq_common_src) $(fastq_parse_src) $(fastq_rng_src)
+
+fastq_qualadj_SOURCES = fastq-qualadj.c $(fastq_common_src) $(fastq_parse_src)