a program to print smith-waterman scores against a query sequence

[fastq-tools.git] / configure.ac

diff --git a/configure.ac b/configure.ac
index 35c887752b7e2bf784e3dd4a1968df87fd5b97be..758f31593a3e714806a17eeb109e213840ff11ee 100644 (file)
--- a/configure.ac
+++ b/configure.ac
@@ -22,6 +22,7 @@ AS_IF([test "x$enable_debug" = xyes],
 
 AC_DEFINE(_FILE_OFFSET_BITS, 64)
 
+AC_PROG_LIBTOOL
 
 # check zlib
 AX_CHECK_ZLIB
@@ -44,6 +45,7 @@ AC_CHECK_HEADER(getopt.h, ,
 CXXFLAGS=$CFLAGS
 
 AC_CONFIG_FILES( [Makefile
-                  src/Makefile] )
+                  src/Makefile
+                  src/swsse2/Makefile] )
 
 AC_OUTPUT