tweak resume even more

[don.git] / resume.mdwn

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 ## UC Riverside
 + **PhD** in Cell, Molecular and Developmental Biology
 + **BS** in Biology
 ## UC Riverside
 + **PhD** in Cell, Molecular and Developmental Biology
 + **BS** in Biology

+

 # Skills
 ## Genomics and Epigenomics
 + Genomics and Epigenomics of complex human diseases including
 # Skills
 ## Genomics and Epigenomics
 + Genomics and Epigenomics of complex human diseases including


@@ -15,26 +16,31 @@
 + Reproducible, scalable analysis using workflows on cloud- and
   cluster-based systems on terabyte-scale datasets
 + Using evolutionary genomics to identify causal human variants
 + Reproducible, scalable analysis using workflows on cloud- and
   cluster-based systems on terabyte-scale datasets
 + Using evolutionary genomics to identify causal human variants

+

 ## Statistics
 + Statistical modeling
 + Addressing confounders and batch effects
 + Reproducible research
 ## Statistics
 + Statistical modeling
 + Addressing confounders and batch effects
 + Reproducible research

+

 ## Big Data
 + Parallel and Cloud Computing
 + Inter-process communication: MPI, OpenMP, Hadoop
 + Filestorage: Gluster, CEFS, GPFS, Lustre
 + Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
 + Debian GNU/Linux system administration
 ## Big Data
 + Parallel and Cloud Computing
 + Inter-process communication: MPI, OpenMP, Hadoop
 + Filestorage: Gluster, CEFS, GPFS, Lustre
 + Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
 + Debian GNU/Linux system administration

+

 ## Mentoring and Leadership
 + Mentored graduate students and Outreachy and Google Summer of Code
   interns
 + Chairperson of the Debian Technical Committee
 + Head developer behind https://bugs.debian.org
 ## Mentoring and Leadership
 + Mentored graduate students and Outreachy and Google Summer of Code
   interns
 + Chairperson of the Debian Technical Committee
 + Head developer behind https://bugs.debian.org

+

 ## Software Development
 + Languages: perl, R, C, C++, python, groovy, assembly, sh, make
 + Collaborative Development: git, travis, continuous integration,
   automated testing
 + Databases: Postgresql (PL/SQL), SQLite, Mysql
 ## Software Development
 + Languages: perl, R, C, C++, python, groovy, assembly, sh, make
 + Collaborative Development: git, travis, continuous integration,
   automated testing
 + Databases: Postgresql (PL/SQL), SQLite, Mysql

+

 ## Communication
 + Strong written communication skills as evidenced by publication
   record
 ## Communication
 + Strong written communication skills as evidenced by publication
   record


@@ -43,22 +49,26 @@
 
 # Experience
 ## Research Scientist at UIUC
 
 # Experience
 ## Research Scientist at UIUC

-+ 2015--Present. University of Illinois at Urbana-Champaign. Epigenetic
++ 2015–Present. University of Illinois at Urbana-Champaign. Epigenetic

   modifications associated with PTSD, the genomic basis of the
   development of parturition in mammals, and detecting adverse
   pregnancy outcomes using urinary exosomes.
   modifications associated with PTSD, the genomic basis of the
   development of parturition in mammals, and detecting adverse
   pregnancy outcomes using urinary exosomes.

+

 ## Postdoctoral Researcher at USC
 ## Postdoctoral Researcher at USC

-+ 2013--2015. Identifying genes and causal alleles associated with
++ 2013–2015. Identifying genes and causal alleles associated with

   Systemic Lupus Erythematosus using genome-wide association,
   next-generation sequencing, computational and biochemical
   approaches.
   Systemic Lupus Erythematosus using genome-wide association,
   next-generation sequencing, computational and biochemical
   approaches.

+

 ## Postdoctoral Researcher at UCR
 ## Postdoctoral Researcher at UCR

-+ 2010--2012. Identifying genes which are associated with Systemic
++ 2010–2012. Identifying genes which are associated with Systemic

   Lupus Erythematosus using prior information and targeted trio-based
   studies.
   Lupus Erythematosus using prior information and targeted trio-based
   studies.

+

 ## Debian Developer
 ## Debian Developer

-+ 2004--Present. \emph{Debian Project}, Developer; Technical Committee
-  Member (2010--Present), Technical Committee Chair (2015--2016).
++ 2004–Present. *Debian Project*, Developer; Technical Committee
+  Member (2010–2016), Technical Committee Chair (2015–2016).
+

 # Authored Software
 + **[Debbugs](http://bugs.debian.org)**: Bug tracking software for the Debian GNU/Linux
    distribution. [https://bugs.debian.org]
 # Authored Software
 + **[Debbugs](http://bugs.debian.org)**: Bug tracking software for the Debian GNU/Linux
    distribution. [https://bugs.debian.org]


@@ -70,7 +80,8 @@
 + **[Helical Wheel Projections](http://rzlab.ucr.edu/scripts/wheel/wheel.cgi?sequence=ABCDEFGHIJLKMNOP&submit=Submit)**:
    Web-based tool to draw helical wheel protein projections.
    [http://rzlab.ucr.edu/scripts/wheel]
 + **[Helical Wheel Projections](http://rzlab.ucr.edu/scripts/wheel/wheel.cgi?sequence=ABCDEFGHIJLKMNOP&submit=Submit)**:
    Web-based tool to draw helical wheel protein projections.
    [http://rzlab.ucr.edu/scripts/wheel]

-* Publications and Presentations
+
+# Publications and Presentations

 + 20 peer-reviewed refereed publications cited over 1700 times:
   [https://dla2.us/pubs]
 + Publication record in GWAS, expression analysis of microarrays,
 + 20 peer-reviewed refereed publications cited over 1700 times:
   [https://dla2.us/pubs]
 + Publication record in GWAS, expression analysis of microarrays,


@@ -91,12 +102,12 @@
   RFA-HD-16-037) Role: Key Personnel
 + **NIAMS** R01-AR045650-04 **Genetics of Childhood Onset SLE** to Chaim O. Jacob.
   Role: Key Personnel
   RFA-HD-16-037) Role: Key Personnel
 + **NIAMS** R01-AR045650-04 **Genetics of Childhood Onset SLE** to Chaim O. Jacob.
   Role: Key Personnel

+

 ## Scholarships and Fellowships
 + 2001--2003: University of California, Riverside Doctoral Fellowship
 + 1997--2001: Regents of the University of California Scholarship.
 
 ## Scholarships and Fellowships
 + 2001--2003: University of California, Riverside Doctoral Fellowship
 + 1997--2001: Regents of the University of California Scholarship.
 

-Academic Information
-------------
+#Academic Information

 
 You can also read my [Curriculum Vitæ](curriculum_vitae)
 ([pdf](dla-cv.pdf)), [Research Statement](research_statement)
 
 You can also read my [Curriculum Vitæ](curriculum_vitae)
 ([pdf](dla-cv.pdf)), [Research Statement](research_statement)