--- /dev/null
+ALTER TABLE [SubSNPAcc_p1_human] ADD
+ CONSTRAINT [pk_SubSNPAcc_p1_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [acc_type_ind],
+ [acc_part]
+ ),
+ CONSTRAINT [ck_SubSNPAcc_p1_human] CHECK ([subsnp_id] >= 1 and [subsnp_id] <= 10000000)
+GO
+
+
+ALTER TABLE [SubSNPAcc_p2_human] ADD
+ CONSTRAINT [pk_SubSNPAcc_p2_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [acc_type_ind],
+ [acc_part]
+ ),
+ CONSTRAINT [ck_SubSNPAcc_p2_human] CHECK ([subsnp_id] >= 10000001 and [subsnp_id] <= 20000000)
+GO
+
+
+ALTER TABLE [SubSNPAcc_p3_human] ADD
+ CONSTRAINT [pk_SubSNPAcc_p3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [acc_type_ind],
+ [acc_part]
+ ),
+ CONSTRAINT [ck_SubSNPAcc_p3] CHECK ([subsnp_id] >= 20000001 and [subsnp_id] <= 30000000)
+GO
+
+
+ALTER TABLE [SubSNPCommLine_p1_human] ADD
+ CONSTRAINT [pk_SubSNPCommLine_p1_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPCommLine_p1_human] CHECK ([subsnp_id] >= 1 and [subsnp_id] <= 10000000)
+GO
+
+
+ALTER TABLE [SubSNPCommLine_p2_human] ADD
+ CONSTRAINT [pk_SubSNPCommLine_p2_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPCommLine_p2_human] CHECK ([subsnp_id] >= 10000001 and [subsnp_id] <= 20000000)
+GO
+
+
+ALTER TABLE [SubSNPCommLine_p3_human] ADD
+ CONSTRAINT [pk_SubSNPCommLine_p3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPCommLine_p3] CHECK ([subsnp_id] >= 20000001 and [subsnp_id] <= 30000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq3_p1_human] ADD
+ CONSTRAINT [pk_SubSNPSeq3_p1_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq3_p1_human] CHECK ([subsnp_id] >= 1 and [subsnp_id] <= 10000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq3_p2_human] ADD
+ CONSTRAINT [pk_SubSNPSeq3_p2_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq3_p2_human] CHECK ([subsnp_id] >= 10000001 and [subsnp_id] <= 20000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq3_p3_human] ADD
+ CONSTRAINT [pk_SubSNPSeq3_p3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq3_p3] CHECK ([subsnp_id] >= 20000001 and [subsnp_id] <= 30000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq5_p1_human] ADD
+ CONSTRAINT [pk_SubSNPSeq5_p1_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq5_p1_human] CHECK ([subsnp_id] >= 1 and [subsnp_id] <= 10000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq5_p2_human] ADD
+ CONSTRAINT [pk_SubSNPSeq5_p2_human] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq5_p2_human] CHECK ([subsnp_id] >= 10000001 and [subsnp_id] <= 20000000)
+GO
+
+
+ALTER TABLE [SubSNPSeq5_p3_human] ADD
+ CONSTRAINT [pk_SubSNPSeq5_p3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq5_p3] CHECK ([subsnp_id] >= 20000001 and [subsnp_id] <= 30000000)
+GO
+
+
+
--- /dev/null
+ALTER TABLE SubSNPAcc_p1_human ADD
+ CONSTRAINT pk_SubSNPAcc_p1_human PRIMARY KEY
+ (
+ subsnp_id,
+ acc_type_ind,
+ acc_part
+ ),
+ ADD CONSTRAINT ck_SubSNPAcc_p1_human CHECK (subsnp_id >= 1 and subsnp_id <= 10000000)
+;
+
+ALTER TABLE SubSNPAcc_p2_human ADD
+ CONSTRAINT pk_SubSNPAcc_p2_human PRIMARY KEY
+ (
+ subsnp_id,
+ acc_type_ind,
+ acc_part
+ ), ADD
+ CONSTRAINT ck_SubSNPAcc_p2_human CHECK (subsnp_id >= 10000001 and subsnp_id <= 20000000)
+;
+
+ALTER TABLE SubSNPAcc_p3_human ADD
+ CONSTRAINT pk_SubSNPAcc_p3 PRIMARY KEY
+ (
+ subsnp_id,
+ acc_type_ind,
+ acc_part
+ ), ADD
+ CONSTRAINT ck_SubSNPAcc_p3 CHECK (subsnp_id >= 20000001 and subsnp_id <= 30000000)
+;
+
+ALTER TABLE SubSNPCommLine_p1_human ADD
+ CONSTRAINT pk_SubSNPCommLine_p1_human PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPCommLine_p1_human CHECK (subsnp_id >= 1 and subsnp_id <= 10000000)
+;
+
+ALTER TABLE SubSNPCommLine_p2_human ADD
+ CONSTRAINT pk_SubSNPCommLine_p2_human PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPCommLine_p2_human CHECK (subsnp_id >= 10000001 and subsnp_id <= 20000000)
+;
+
+ALTER TABLE SubSNPCommLine_p3_human ADD
+ CONSTRAINT pk_SubSNPCommLine_p3 PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPCommLine_p3 CHECK (subsnp_id >= 20000001 and subsnp_id <= 30000000)
+;
+
+ALTER TABLE SubSNPSeq3_p1_human ADD
+ CONSTRAINT pk_SubSNPSeq3_p1_human PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq3_p1_human CHECK (subsnp_id >= 1 and subsnp_id <= 10000000)
+;
+
+ALTER TABLE SubSNPSeq3_p2_human ADD
+ CONSTRAINT pk_SubSNPSeq3_p2_human PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq3_p2_human CHECK (subsnp_id >= 10000001 and subsnp_id <= 20000000)
+;
+
+ALTER TABLE SubSNPSeq3_p3_human ADD
+ CONSTRAINT pk_SubSNPSeq3_p3 PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq3_p3 CHECK (subsnp_id >= 20000001 and subsnp_id <= 30000000)
+;
+
+ALTER TABLE SubSNPSeq5_p1_human ADD
+ CONSTRAINT pk_SubSNPSeq5_p1_human PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq5_p1_human CHECK (subsnp_id >= 1 and subsnp_id <= 10000000)
+;
+
+ALTER TABLE SubSNPSeq5_p2_human ADD
+ CONSTRAINT pk_SubSNPSeq5_p2_human PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq5_p2_human CHECK (subsnp_id >= 10000001 and subsnp_id <= 20000000)
+;
+
+ALTER TABLE SubSNPSeq5_p3_human ADD
+ CONSTRAINT pk_SubSNPSeq5_p3 PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq5_p3 CHECK (subsnp_id >= 20000001 and subsnp_id <= 30000000)
+;
+
+
--- /dev/null
+
+
+
+
+
+
+
+
+
+
+
+
+
--- /dev/null
+
+
+
+
+
+
+
+
+
+
+
+
+
--- /dev/null
+CREATE TABLE [SubSNPAcc_p1_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [acc_type_ind] [char] (1) NOT NULL ,
+ [acc_part] [varchar] (16) NOT NULL ,
+ [acc_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPAcc_p2_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [acc_type_ind] [char] (1) NOT NULL ,
+ [acc_part] [varchar] (16) NOT NULL ,
+ [acc_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPAcc_p3_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [acc_type_ind] [char] (1) NOT NULL ,
+ [acc_part] [varchar] (16) NOT NULL ,
+ [acc_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPCommLine_p1_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPCommLine_p2_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPCommLine_p3_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq3_p1_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq3_p2_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq3_p3_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq5_p1_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq5_p2_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq5_p3_human] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_table_rowcount] (
+ [tabname] [varchar] (64) NOT NULL ,
+ [row_cnt] [int] NOT NULL ,
+ [build_id] [int] NOT NULL ,
+ [update_time] [datetime] NOT NULL ,
+ [rows_in_spaceused] [int] NULL ,
+ [reserved_KB_spaceused] [int] NULL ,
+ [data_KB_spaceused] [int] NULL ,
+ [index_size_KB_spaceused] [int] NULL ,
+ [unused_KB_spaceused] [int] NULL
+)
+GO
+
+
--- /dev/null
+CREATE TABLE SubSNPAcc_p1_human (
+ subsnp_id int NOT NULL ,
+ acc_type_ind char (1) NOT NULL ,
+ acc_part varchar (16) NOT NULL ,
+ acc_ver int NULL
+)
+;
+
+CREATE TABLE SubSNPAcc_p2_human (
+ subsnp_id int NOT NULL ,
+ acc_type_ind char (1) NOT NULL ,
+ acc_part varchar (16) NOT NULL ,
+ acc_ver int NULL
+)
+;
+
+CREATE TABLE SubSNPAcc_p3_human (
+ subsnp_id int NOT NULL ,
+ acc_type_ind char (1) NOT NULL ,
+ acc_part varchar (16) NOT NULL ,
+ acc_ver int NULL
+)
+;
+
+CREATE TABLE SubSNPCommLine_p1_human (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPCommLine_p2_human (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPCommLine_p3_human (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq3_p1_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq3_p2_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq3_p3_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq5_p1_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq5_p2_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq5_p3_human (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE dn_table_rowcount (
+ tabname varchar (64) NOT NULL ,
+ row_cnt int NOT NULL ,
+ build_id int NOT NULL ,
+ update_time TIMESTAMP NOT NULL ,
+ rows_in_spaceused int NULL ,
+ reserved_KB_spaceused int NULL ,
+ data_KB_spaceused int NULL ,
+ index_size_KB_spaceused int NULL ,
+ unused_KB_spaceused int NULL
+)
+;
+
--- /dev/null
+ALTER TABLE [AlleleFreqBySsPop] ADD
+ CONSTRAINT [pk_AlleleFreqBySsPop_b129] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [pop_id],
+ [allele_id]
+ )
+GO
+
+
+ALTER TABLE [Batch] ADD
+ CONSTRAINT [pk_Batch] PRIMARY KEY CLUSTERED
+ (
+ [batch_id]
+ ),
+ CONSTRAINT [ck_batch_type] CHECK ([batch_type]='ANC' OR ([batch_type]='MNT' OR ([batch_type]='VAL' OR ([batch_type]='POP' OR ([batch_type]='IND' OR ([batch_type]='SNP' OR [batch_type]='NOV'))))))
+GO
+
+
+ALTER TABLE [BatchCita] ADD
+ CONSTRAINT [pk_BatchCita] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [position]
+ )
+GO
+
+
+ALTER TABLE [BatchCommLine] ADD
+ CONSTRAINT [pk_BatchCommLine] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [BatchCultivar] ADD
+ CONSTRAINT [pk_BatchCultivar] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [BatchMeExLine] ADD
+ CONSTRAINT [pk_BatchMeExLine] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [BatchStrain] ADD
+ CONSTRAINT [pk_BatchStrain] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [BatchValCode] ADD
+ CONSTRAINT [pk_BatchValCode] PRIMARY KEY CLUSTERED
+ (
+ [batch_id]
+ )
+GO
+
+
+ALTER TABLE [Contact] ADD
+ CONSTRAINT [pk_Contact] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [handle]
+ )
+GO
+
+
+ALTER TABLE [FreqSummaryBySsPop] ADD
+ CONSTRAINT [pk_FreqSummaryBySsPop] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [pop_id]
+ )
+GO
+
+
+ALTER TABLE [GeneIdToName] ADD
+ CONSTRAINT [pk_GeneIdToName] PRIMARY KEY CLUSTERED
+ (
+ [gene_id]
+ )
+GO
+
+
+ALTER TABLE [GtyFreqBySsPop] ADD
+ CONSTRAINT [pk_GtyFreqBySsPop_b129] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [pop_id],
+ [unigty_id]
+ )
+GO
+
+
+ALTER TABLE [IndGrpCode] ADD
+ CONSTRAINT [pk_IndGrpCode] PRIMARY KEY CLUSTERED
+ (
+ [code]
+ )
+GO
+
+
+ALTER TABLE [IndivBySource] ADD
+ CONSTRAINT [pk_IndivBySource] PRIMARY KEY NONCLUSTERED
+ (
+ [src_id],
+ [src_ind_id]
+ )
+GO
+
+
+
+ALTER TABLE [Individual] ADD
+ CONSTRAINT [pk_Individual] PRIMARY KEY CLUSTERED
+ (
+ [ind_id]
+ )
+GO
+
+
+
+ALTER TABLE [Pedigree] ADD
+ CONSTRAINT [p_ped_id] PRIMARY KEY CLUSTERED
+ (
+ [ped_id]
+ )
+GO
+
+
+ALTER TABLE [PedigreeIndividual] ADD
+ CONSTRAINT [pk_PedigreeIndividual] PRIMARY KEY CLUSTERED
+ (
+ [ped_id],
+ [ind_id]
+ )
+GO
+
+
+ALTER TABLE [PopLine] ADD
+ CONSTRAINT [pk_PopLine] PRIMARY KEY CLUSTERED
+ (
+ [pop_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [PopMandLine] ADD
+ CONSTRAINT [pk_PopMandLine] PRIMARY KEY NONCLUSTERED
+ (
+ [pop_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [Population] ADD
+ CONSTRAINT [pk_Population_pop_id] PRIMARY KEY CLUSTERED
+ (
+ [pop_id]
+ )
+GO
+
+
+
+
+
+ALTER TABLE [SNPAlleleFreq] ADD
+ CONSTRAINT [pk_SNPAlleleFreq] PRIMARY KEY CLUSTERED
+ (
+ [snp_id],
+ [allele_id]
+ )
+GO
+
+
+ALTER TABLE [SNPAncestralAllele] ADD
+ CONSTRAINT [DF__SNPAncest__batch__664F5149] DEFAULT ((0)) FOR [batch_id],
+ CONSTRAINT [pk_SNPAncestralAllele] PRIMARY KEY CLUSTERED
+ (
+ [snp_id],
+ [batch_id]
+ )
+GO
+
+
+ALTER TABLE [SNPGtyFreq] ADD
+ CONSTRAINT [pk_SNPGtyFreq] PRIMARY KEY CLUSTERED
+ (
+ [snp_id],
+ [unigty_id]
+ )
+GO
+
+
+ALTER TABLE [SNPHWProb] ADD
+ CONSTRAINT [pk_SNPHWProb] PRIMARY KEY CLUSTERED
+ (
+ [snp_id]
+ )
+GO
+
+
+ALTER TABLE [SNPHistory] ADD
+ CONSTRAINT [pk_SNPHistory] PRIMARY KEY CLUSTERED
+ (
+ [snp_id]
+ )
+GO
+
+
+ALTER TABLE [SNPPubmed] ADD
+ CONSTRAINT [pk_SNPPubmed] PRIMARY KEY CLUSTERED
+ (
+ [snp_id],
+ [subsnp_id],
+ [pubmed_id],
+ [type]
+ )
+GO
+
+
+
+
+ALTER TABLE [SNPVal] ADD
+ CONSTRAINT [pk_SNPVal] PRIMARY KEY CLUSTERED
+ (
+ [batch_id],
+ [snp_id]
+ )
+GO
+
+
+
+ALTER TABLE [SNP_bitfield] ADD
+ CONSTRAINT [pk_SNP_bitfield] PRIMARY KEY CLUSTERED
+ (
+ [snp_id]
+ )
+GO
+
+
+ALTER TABLE [SubPop] ADD
+ CONSTRAINT [DF__SubPopB10__last___19AB9A98] DEFAULT (getdate()) FOR [last_updated_time],
+ PRIMARY KEY CLUSTERED
+ (
+ [batch_id],
+ [subsnp_id],
+ [pop_id],
+ [type]
+ ),
+ CONSTRAINT [fk_SubPop_batch_id] FOREIGN KEY
+ (
+ [batch_id]
+ ) REFERENCES [Batch] (
+ [batch_id]
+ ),
+ CONSTRAINT [fk_SubPop_pop] FOREIGN KEY
+ (
+ [pop_id]
+ ) REFERENCES [Population] (
+ [pop_id]
+ ),
+ CHECK ([type] = 'GTY' or ([type] = 'HET' or [type] = 'ALE'))
+GO
+
+
+ALTER TABLE [SubPopAllele] ADD
+ CONSTRAINT [fk_SubPopAllele_bid_ss_pop_type] FOREIGN KEY
+ (
+ [batch_id],
+ [subsnp_id],
+ [pop_id],
+ [type]
+ ) REFERENCES [SubPop] (
+ [batch_id],
+ [subsnp_id],
+ [pop_id],
+ [type]
+ ) ON DELETE CASCADE
+GO
+
+
+ALTER TABLE [SubPopGty] ADD
+ CONSTRAINT [pk_SubPopGty] PRIMARY KEY CLUSTERED
+ (
+ [subpop_id],
+ [gty_id]
+ )
+GO
+
+
+ALTER TABLE [SubSNP] ADD
+ CONSTRAINT [pk_SubSNP] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id]
+ )
+GO
+
+
+ALTER TABLE [SubSNPAcc_ins] ADD
+ CONSTRAINT [pk_SubSNPAcc] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [acc_part],
+ [acc_type_ind]
+ ),
+ CONSTRAINT [ck_SubSNPAcc_ins] CHECK ([subsnp_id]>=(30000001) AND [subsnp_id]<=(300000000))
+GO
+
+
+ALTER TABLE [SubSNPCommLine_ins] ADD
+ CONSTRAINT [pk_SubSNPCommLine] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPCommLine_ins] CHECK ([subsnp_id]>=(30000001) AND [subsnp_id]<=(300000000))
+GO
+
+
+ALTER TABLE [SubSNPHGVS] ADD
+ CONSTRAINT [pk_SubSNPHGVS] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id]
+ )
+GO
+
+
+ALTER TABLE [SubSNPLinkout] ADD
+ CONSTRAINT [DF__SubSNPLin__link___660506BC] DEFAULT ('NA') FOR [link_type],
+ CONSTRAINT [pk_SubSNPLinkout] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [link_type]
+ ),
+ CONSTRAINT [ck_SubSNPLinkout_link_type] CHECK ([link_type]='NA' OR [link_type]='OTH' OR [link_type]='SRC')
+GO
+
+
+ALTER TABLE [SubSNPMdFailLn] ADD
+ CONSTRAINT [pk_SubSNPMdFailLn] PRIMARY KEY NONCLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [SubSNPNoVariSeq] ADD
+ CONSTRAINT [pk_SubSNPNoVariSeq] PRIMARY KEY NONCLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [SubSNPOmim] ADD
+ CONSTRAINT [pk_SubSNPOmim] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id]
+ )
+GO
+
+
+ALTER TABLE [SubSNPPubmed] ADD
+ CONSTRAINT [pk_SubSNPPubmed] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [line_num]
+ )
+GO
+
+
+ALTER TABLE [SubSNPSeq3_ins] ADD
+ CONSTRAINT [pk_SubSNPSeq3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq3_ins] CHECK ([subsnp_id]>=(30000001) AND [subsnp_id]<=(300000000))
+GO
+
+
+ALTER TABLE [SubSNPSeq5_ins] ADD
+ CONSTRAINT [pk_SubSNPSeq5] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [type],
+ [line_num]
+ ),
+ CONSTRAINT [ck_SubSNPSeq5_ins] CHECK ([subsnp_id]>=(30000001) AND [subsnp_id]<=(300000000))
+GO
+
+
+ALTER TABLE [SubSNPSeqPos] ADD
+ CONSTRAINT [pk_SubSNPSeqPos] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id]
+ )
+GO
+
+
+ALTER TABLE [SubSNP_top_or_bot] ADD
+ CONSTRAINT [PK__t_ss_top_or_bot__0D5DFFA8] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id]
+ )
+GO
+
+
+ALTER TABLE [SubmittedIndividual] ADD
+ CONSTRAINT [DF__Submitted__ploid__41661CE5] DEFAULT (2) FOR [ploidy],
+ CONSTRAINT [pk_SubmittedIndividual] PRIMARY KEY CLUSTERED
+ (
+ [pop_id],
+ [loc_ind_id_upp]
+ )
+GO
+
+
+ALTER TABLE [Synonym] ADD
+ CONSTRAINT [pk_Synonym] PRIMARY KEY NONCLUSTERED
+ (
+ [subsnp_id],
+ [type]
+ )
+GO
+
+
+ALTER TABLE [b132_ContigInfo_37_1] ADD
+ CONSTRAINT [pk_b132_ContigInfo] PRIMARY KEY CLUSTERED
+ (
+ [ctg_id]
+ )
+GO
+
+
+
+
+
+
+
+ALTER TABLE [b132_SNPContigLoc_37_1] ADD
+ CONSTRAINT [ck_snp_type] CHECK ([snp_type]='rs')
+GO
+
+
+ALTER TABLE [b132_SNPContigLocusId_37_1] ADD
+ CONSTRAINT [ck_fxn] CHECK ([fxn_class]=(75) OR [fxn_class]=(73) OR [fxn_class]=(55) OR [fxn_class]=(53) OR [fxn_class]=(45) OR [fxn_class]=(44) OR [fxn_class]=(43) OR [fxn_class]=(42) OR [fxn_class]=(41) OR [fxn_class]=(15) OR [fxn_class]=(13) OR [fxn_class]=(8) OR [fxn_class]=(6) OR [fxn_class]=(3))
+GO
+
+
+ALTER TABLE [b132_SNPMapInfo_37_1] ADD
+ CONSTRAINT [ck_SNPMapInfo_snp_type] CHECK ([snp_type]='rs')
+GO
+
+
+ALTER TABLE [dn_IND_batchCount] ADD
+ CONSTRAINT [pk_dn_IND_batchCount] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id],
+ [pop_id]
+ )
+GO
+
+
+
+ALTER TABLE [dn_PopulationIndGrp] ADD
+ CONSTRAINT [pk_dn_PopulationIndGrp] PRIMARY KEY CLUSTERED
+ (
+ [pop_id]
+ )
+GO
+
+
+ALTER TABLE [dn_batchCount] ADD
+ CONSTRAINT [pk_dn_batchCount] PRIMARY KEY NONCLUSTERED
+ (
+ [batch_id]
+ )
+GO
+
+
+ALTER TABLE [dn_handleCount] ADD
+ CONSTRAINT [pk_dn_handleCount] PRIMARY KEY NONCLUSTERED
+ (
+ [handle],
+ [batch_type]
+ )
+GO
+
+
+
+
--- /dev/null
+ALTER TABLE AlleleFreqBySsPop ADD
+ CONSTRAINT pk_AlleleFreqBySsPop_b129 PRIMARY KEY
+ (
+ subsnp_id,
+ pop_id,
+ allele_id
+ )
+;
+
+ALTER TABLE Batch ADD
+ CONSTRAINT pk_Batch PRIMARY KEY
+ (
+ batch_id
+ ), ADD
+ CONSTRAINT ck_batch_type CHECK (batch_type='ANC' OR (batch_type='MNT' OR (batch_type='VAL' OR (batch_type='POP' OR (batch_type='IND' OR (batch_type='SNP' OR batch_type='NOV'))))))
+;
+
+ALTER TABLE BatchCita ADD
+ CONSTRAINT pk_BatchCita PRIMARY KEY
+ (
+ batch_id,
+ position
+ )
+;
+
+ALTER TABLE BatchCommLine ADD
+ CONSTRAINT pk_BatchCommLine PRIMARY KEY
+ (
+ batch_id,
+ line_num
+ )
+;
+
+ALTER TABLE BatchCultivar ADD
+ CONSTRAINT pk_BatchCultivar PRIMARY KEY
+ (
+ batch_id,
+ line_num
+ )
+;
+
+ALTER TABLE BatchMeExLine ADD
+ CONSTRAINT pk_BatchMeExLine PRIMARY KEY
+ (
+ batch_id,
+ line_num
+ )
+;
+
+ALTER TABLE BatchStrain ADD
+ CONSTRAINT pk_BatchStrain PRIMARY KEY
+ (
+ batch_id,
+ line_num
+ )
+;
+
+ALTER TABLE BatchValCode ADD
+ CONSTRAINT pk_BatchValCode PRIMARY KEY
+ (
+ batch_id
+ )
+;
+
+ALTER TABLE Contact ADD
+ CONSTRAINT pk_Contact PRIMARY KEY
+ (
+ batch_id,
+ handle
+ )
+;
+
+ALTER TABLE FreqSummaryBySsPop ADD
+ CONSTRAINT pk_FreqSummaryBySsPop PRIMARY KEY
+ (
+ subsnp_id,
+ pop_id
+ )
+;
+
+ALTER TABLE GeneIdToName ADD
+ CONSTRAINT pk_GeneIdToName PRIMARY KEY
+ (
+ gene_id
+ )
+;
+
+ALTER TABLE GtyFreqBySsPop ADD
+ CONSTRAINT pk_GtyFreqBySsPop_b129 PRIMARY KEY
+ (
+ subsnp_id,
+ pop_id,
+ unigty_id
+ )
+;
+
+ALTER TABLE IndGrpCode ADD
+ CONSTRAINT pk_IndGrpCode PRIMARY KEY
+ (
+ code
+ )
+;
+
+ALTER TABLE IndivBySource ADD
+ CONSTRAINT pk_IndivBySource PRIMARY KEY
+ (
+ src_id,
+ src_ind_id
+ )
+;
+
+
+ALTER TABLE Individual ADD
+ CONSTRAINT pk_Individual PRIMARY KEY
+ (
+ ind_id
+ )
+;
+
+
+ALTER TABLE Pedigree ADD
+ CONSTRAINT p_ped_id PRIMARY KEY
+ (
+ ped_id
+ )
+;
+
+ALTER TABLE PedigreeIndividual ADD
+ CONSTRAINT pk_PedigreeIndividual PRIMARY KEY
+ (
+ ped_id,
+ ind_id
+ )
+;
+
+ALTER TABLE PopLine ADD
+ CONSTRAINT pk_PopLine PRIMARY KEY
+ (
+ pop_id,
+ line_num
+ )
+;
+
+ALTER TABLE PopMandLine ADD
+ CONSTRAINT pk_PopMandLine PRIMARY KEY
+ (
+ pop_id,
+ line_num
+ )
+;
+
+ALTER TABLE Population ADD
+ CONSTRAINT pk_Population_pop_id PRIMARY KEY
+ (
+ pop_id
+ )
+;
+
+
+
+
+ALTER TABLE SNPAlleleFreq ADD
+ CONSTRAINT pk_SNPAlleleFreq PRIMARY KEY
+ (
+ snp_id,
+ allele_id
+ )
+;
+
+ALTER TABLE SNPAncestralAllele ADD
+-- CONSTRAINT DF__SNPAncest__batch__664F5149 DEFAULT ((0)) FOR batch_id,
+ CONSTRAINT pk_SNPAncestralAllele PRIMARY KEY
+ (
+ snp_id,
+ batch_id
+ )
+;
+
+ALTER TABLE SNPGtyFreq ADD
+ CONSTRAINT pk_SNPGtyFreq PRIMARY KEY
+ (
+ snp_id,
+ unigty_id
+ )
+;
+
+ALTER TABLE SNPHWProb ADD
+ CONSTRAINT pk_SNPHWProb PRIMARY KEY
+ (
+ snp_id
+ )
+;
+
+ALTER TABLE SNPHistory ADD
+ CONSTRAINT pk_SNPHistory PRIMARY KEY
+ (
+ snp_id
+ )
+;
+
+ALTER TABLE SNPPubmed ADD
+ CONSTRAINT pk_SNPPubmed PRIMARY KEY
+ (
+ snp_id,
+ subsnp_id,
+ pubmed_id,
+ type
+ )
+;
+
+
+
+ALTER TABLE SNPVal ADD
+ CONSTRAINT pk_SNPVal PRIMARY KEY
+ (
+ batch_id,
+ snp_id
+ )
+;
+
+
+ALTER TABLE SNP_bitfield ADD
+ CONSTRAINT pk_SNP_bitfield PRIMARY KEY
+ (
+ snp_id
+ )
+;
+
+ALTER TABLE SubPop ADD
+-- CONSTRAINT DF__SubPopB10__last___19AB9A98 DEFAULT (getdate()) FOR last_updated_time,
+ PRIMARY KEY
+ (
+ batch_id,
+ subsnp_id,
+ pop_id,
+ type
+ ), ADD
+ CONSTRAINT fk_SubPop_batch_id FOREIGN KEY
+ (
+ batch_id
+ ) REFERENCES Batch (
+ batch_id
+ ), ADD
+ CONSTRAINT fk_SubPop_pop FOREIGN KEY
+ (
+ pop_id
+ ) REFERENCES Population (
+ pop_id
+ ), ADD
+ CHECK (type = 'GTY' or (type = 'HET' or type = 'ALE'))
+;
+
+ALTER TABLE SubPopAllele ADD
+ CONSTRAINT fk_SubPopAllele_bid_ss_pop_type FOREIGN KEY
+ (
+ batch_id,
+ subsnp_id,
+ pop_id,
+ type
+ ) REFERENCES SubPop (
+ batch_id,
+ subsnp_id,
+ pop_id,
+ type
+ ) ON DELETE CASCADE
+;
+
+ALTER TABLE SubPopGty ADD
+ CONSTRAINT pk_SubPopGty PRIMARY KEY
+ (
+ subpop_id,
+ gty_id
+ )
+;
+
+ALTER TABLE SubSNP ADD
+ CONSTRAINT pk_SubSNP PRIMARY KEY
+ (
+ subsnp_id
+ )
+;
+
+ALTER TABLE SubSNPAcc_ins ADD
+ CONSTRAINT pk_SubSNPAcc PRIMARY KEY
+ (
+ subsnp_id,
+ acc_part,
+ acc_type_ind
+ ), ADD
+ CONSTRAINT ck_SubSNPAcc_ins CHECK (subsnp_id>=(30000001) AND subsnp_id<=(300000000))
+;
+
+ALTER TABLE SubSNPCommLine_ins ADD
+ CONSTRAINT pk_SubSNPCommLine PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPCommLine_ins CHECK (subsnp_id>=(30000001) AND subsnp_id<=(300000000))
+;
+
+ALTER TABLE SubSNPHGVS ADD
+ CONSTRAINT pk_SubSNPHGVS PRIMARY KEY
+ (
+ subsnp_id
+ )
+;
+
+ALTER TABLE SubSNPLinkout ADD
+-- CONSTRAINT DF__SubSNPLin__link___660506BC DEFAULT ('NA') FOR link_type,
+ CONSTRAINT pk_SubSNPLinkout PRIMARY KEY
+ (
+ subsnp_id,
+ link_type
+ ), ADD
+ CONSTRAINT ck_SubSNPLinkout_link_type CHECK (link_type='NA' OR link_type='OTH' OR link_type='SRC')
+;
+
+ALTER TABLE SubSNPMdFailLn ADD
+ CONSTRAINT pk_SubSNPMdFailLn PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ )
+;
+
+ALTER TABLE SubSNPNoVariSeq ADD
+ CONSTRAINT pk_SubSNPNoVariSeq PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ )
+;
+
+ALTER TABLE SubSNPOmim ADD
+ CONSTRAINT pk_SubSNPOmim PRIMARY KEY
+ (
+ subsnp_id
+ )
+;
+
+ALTER TABLE SubSNPPubmed ADD
+ CONSTRAINT pk_SubSNPPubmed PRIMARY KEY
+ (
+ subsnp_id,
+ line_num
+ )
+;
+
+ALTER TABLE SubSNPSeq3_ins ADD
+ CONSTRAINT pk_SubSNPSeq3 PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq3_ins CHECK (subsnp_id>=(30000001) AND subsnp_id<=(300000000))
+;
+
+ALTER TABLE SubSNPSeq5_ins ADD
+ CONSTRAINT pk_SubSNPSeq5 PRIMARY KEY
+ (
+ subsnp_id,
+ type,
+ line_num
+ ), ADD
+ CONSTRAINT ck_SubSNPSeq5_ins CHECK (subsnp_id>=(30000001) AND subsnp_id<=(300000000))
+;
+
+ALTER TABLE SubSNPSeqPos ADD
+ CONSTRAINT pk_SubSNPSeqPos PRIMARY KEY
+ (
+ subsnp_id
+x )
+;
+
+ALTER TABLE SubSNP_top_or_bot ADD
+ CONSTRAINT PK__t_ss_top_or_bot__0D5DFFA8 PRIMARY KEY
+ (
+ subsnp_id
+ )
+;
+
+ALTER TABLE SubmittedIndividual ADD
+-- CONSTRAINT DF__Submitted__ploid__41661CE5 DEFAULT (2) FOR ploidy,
+ CONSTRAINT pk_SubmittedIndividual PRIMARY KEY
+ (
+ pop_id,
+ loc_ind_id_upp
+ )
+;
+
+ALTER TABLE Synonym ADD
+ CONSTRAINT pk_Synonym PRIMARY KEY
+ (
+ subsnp_id,
+ type
+ )
+;
+
+ALTER TABLE b132_ContigInfo_37_1 ADD
+ CONSTRAINT pk_b132_ContigInfo PRIMARY KEY
+ (
+ ctg_id
+ )
+;
+
+
+
+
+
+
+ALTER TABLE b132_SNPContigLoc_37_1 ADD
+ CONSTRAINT ck_snp_type CHECK (snp_type='rs')
+;
+
+ALTER TABLE b132_SNPContigLocusId_37_1 ADD
+ CONSTRAINT ck_fxn CHECK (fxn_class=(75) OR fxn_class=(73) OR fxn_class=(55) OR fxn_class=(53) OR fxn_class=(45) OR fxn_class=(44) OR fxn_class=(43) OR fxn_class=(42) OR fxn_class=(41) OR fxn_class=(15) OR fxn_class=(13) OR fxn_class=(8) OR fxn_class=(6) OR fxn_class=(3))
+;
+
+ALTER TABLE b132_SNPMapInfo_37_1 ADD
+ CONSTRAINT ck_SNPMapInfo_snp_type CHECK (snp_type='rs')
+;
+
+ALTER TABLE dn_IND_batchCount ADD
+ CONSTRAINT pk_dn_IND_batchCount PRIMARY KEY
+ (
+ batch_id,
+ pop_id
+ )
+;
+
+
+ALTER TABLE dn_PopulationIndGrp ADD
+ CONSTRAINT pk_dn_PopulationIndGrp PRIMARY KEY
+ (
+ pop_id
+ )
+;
+
+ALTER TABLE dn_batchCount ADD
+ CONSTRAINT pk_dn_batchCount PRIMARY KEY
+ (
+ batch_id
+ )
+;
+
+ALTER TABLE dn_handleCount ADD
+ CONSTRAINT pk_dn_handleCount PRIMARY KEY
+ (
+ handle,
+ batch_type
+ )
+;
+
+
+
--- /dev/null
+
+ CREATE INDEX [i_tax_id] ON [Batch]([tax_id])
+GO
+
+ CREATE INDEX [i_submitted_time] ON [Batch]([submitted_time])
+GO
+
+ CREATE INDEX [i_handle_loc_batch_id] ON [Batch]([handle], [loc_batch_id])
+GO
+
+ CREATE INDEX [i_pop_id] ON [Batch]([pop_id])
+GO
+
+ CREATE INDEX [i_success_rate_int] ON [Batch]([success_rate_int])
+GO
+
+ CREATE INDEX [i_method_id] ON [Batch]([method_id])
+GO
+
+ CREATE INDEX [i_lbid_u] ON [Batch]([loc_batch_id_upp])
+GO
+
+ CREATE INDEX [i_last_updated] ON [Batch]([last_updated_time])
+GO
+
+
+ CREATE INDEX [i_pub_id] ON [BatchCita]([pub_id])
+GO
+
+
+
+ CREATE INDEX [i_BatchCultivar2] ON [BatchCultivar]([line])
+GO
+
+
+
+ CREATE INDEX [i_strain] ON [BatchStrain]([line])
+GO
+
+
+
+
+
+
+
+
+
+
+
+
+ CREATE UNIQUE INDEX [i_curator_ped_id] ON [Pedigree]([curator], [curator_ped_id])
+GO
+
+
+ CREATE UNIQUE INDEX [i_ind_ped] ON [PedigreeIndividual]([ind_id], [ped_id])
+GO
+
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_pid_line_num] ON [PopMandLine]([pop_id], [line_num])
+GO
+
+
+ CREATE UNIQUE INDEX [i_handle_loc_pop_id_upp] ON [Population]([handle], [loc_pop_id_upp])
+GO
+
+ CREATE UNIQUE INDEX [i_handle_loc_pop_id] ON [Population]([handle], [loc_pop_id])
+GO
+
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rs] ON [SNP]([snp_id])
+GO
+
+ CREATE INDEX [i_exemplarSs] ON [SNP]([exemplar_subsnp_id], [snp_id])
+GO
+
+
+ CREATE INDEX [i_rs] ON [SNP3D]([snp_id])
+GO
+
+
+
+
+
+
+ CREATE INDEX [i_hist_time] ON [SNPHistory]([history_create_time])
+GO
+
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_ss] ON [SNPSubSNPLink]([subsnp_id])
+GO
+
+ CREATE INDEX [i_rs] ON [SNPSubSNPLink]([snp_id], [subsnp_id], [substrand_reversed_flag])
+GO
+
+
+ CREATE CLUSTERED INDEX [i_snp_id] ON [SNPSubSNPLinkHistory]([snp_id])
+GO
+
+ CREATE UNIQUE INDEX [i_ss_rs] ON [SNPSubSNPLinkHistory]([subsnp_id], [snp_id])
+GO
+
+ CREATE INDEX [i_build_id] ON [SNPSubSNPLinkHistory]([build_id])
+GO
+
+ CREATE INDEX [i_build_id_when_history_made] ON [SNPSubSNPLinkHistory]([build_id_when_history_made])
+GO
+
+
+ CREATE INDEX [i_rs] ON [SNPVal]([snp_id])
+GO
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rs_hgvs] ON [SNP_HGVS]([snp_id], [hgvs_name])
+GO
+
+
+ CREATE INDEX [i_link_prop_b2] ON [SNP_bitfield]([link_prop_b2])
+GO
+
+
+ CREATE INDEX [i_ss] ON [SubPop]([subsnp_id])
+GO
+
+ CREATE INDEX [i_pop_ss] ON [SubPop]([pop_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_subpop_id] ON [SubPop]([subpop_id])
+GO
+
+
+ CREATE UNIQUE CLUSTERED INDEX [iuc_SubPopAllele] ON [SubPopAllele]([batch_id], [pop_id], [subsnp_id], [type], [allele], [other])
+GO
+
+ CREATE INDEX [iSubPopAllele1] ON [SubPopAllele]([freq])
+GO
+
+ CREATE INDEX [iSubPopAllele2] ON [SubPopAllele]([freq_max])
+GO
+
+ CREATE INDEX [iSubPopAllele3] ON [SubPopAllele]([freq_min])
+GO
+
+ CREATE INDEX [i_subsnp_id] ON [SubPopAllele]([subsnp_id])
+GO
+
+ CREATE INDEX [i_type] ON [SubPopAllele]([type])
+GO
+
+ CREATE INDEX [i_last_updated_time] ON [SubPopAllele]([last_updated_time])
+GO
+
+ CREATE INDEX [i_allele_id] ON [SubPopAllele]([allele_id])
+GO
+
+ CREATE INDEX [i_subpop_id] ON [SubPopAllele]([subpop_id])
+GO
+
+ CREATE UNIQUE INDEX [i_sp_ale] ON [SubPopAllele]([subpop_id], [type], [allele], [other])
+GO
+
+
+ CREATE INDEX [i_subpop_id] ON [SubPopGty]([subpop_id])
+GO
+
+ CREATE INDEX [i_gty_id] ON [SubPopGty]([gty_id])
+GO
+
+
+ CREATE INDEX [i_loc_snp] ON [SubSNP]([loc_snp_id_upp], [subsnp_id])
+GO
+
+ CREATE INDEX [i_bid_ss] ON [SubSNP]([batch_id], [subsnp_id])
+GO
+
+
+ CREATE INDEX [i_acc_part_ind] ON [SubSNPAcc_ins]([acc_part], [acc_type_ind], [subsnp_id])
+GO
+
+
+
+
+
+ CREATE INDEX [i_subsnp_id] ON [SubSNPMdFailLn]([subsnp_id])
+GO
+
+
+
+
+ CREATE INDEX [i_pmid] ON [SubSNPPubmed]([pubmed_id])
+GO
+
+
+
+
+
+
+ CREATE UNIQUE INDEX [i_submitted_ind_id] ON [SubmittedIndividual]([submitted_ind_id])
+GO
+
+ CREATE INDEX [i_ind] ON [SubmittedIndividual]([ind_id])
+GO
+
+
+
+ CREATE UNIQUE INDEX [idxContigName] ON [b132_ContigInfo_37_1]([contig_name])
+GO
+
+ CREATE INDEX [idxContigLabel] ON [b132_ContigInfo_37_1]([contig_label])
+GO
+
+ CREATE INDEX [idxGroupTerm] ON [b132_ContigInfo_37_1]([group_term])
+GO
+
+ CREATE UNIQUE INDEX [idxCtgGi] ON [b132_ContigInfo_37_1]([contig_gi])
+GO
+
+ CREATE INDEX [idxContigId] ON [b132_ContigInfo_37_1]([ctg_id])
+GO
+
+ CREATE INDEX [idxContigNameAcc] ON [b132_ContigInfo_37_1]([contig_name], [contig_acc])
+GO
+
+
+ CREATE INDEX [i_order_assem_132] ON [b132_GenomeAssemblyInfo_37_1]([rep_order], [assembly])
+GO
+
+
+ CREATE INDEX [idxGi] ON [b132_MapLinkInfo_37_1]([gi])
+GO
+
+
+ CREATE CLUSTERED INDEX [i_rs_gi_pos] ON [b132_MapLink_37_1]([snp_id], [gi])
+GO
+
+ CREATE INDEX [idxSnpLoc] ON [b132_MapLink_37_1]([gi], [offset], [asn_to])
+GO
+
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rs] ON [b132_SNPChrPosOnRef_37_1]([snp_id])
+GO
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rs] ON [b132_SNPContigLoc_37_1]([snp_id], [ctg_id], [asn_from])
+GO
+
+ CREATE INDEX [i_ctgPos] ON [b132_SNPContigLoc_37_1]([ctg_id], [asn_from])
+GO
+
+ CREATE INDEX [idxSnpId] ON [b132_SNPContigLoc_37_1]([snp_type], [snp_id])
+GO
+
+ CREATE INDEX [iCtgSnp] ON [b132_SNPContigLoc_37_1]([ctg_id], [snp_id])
+GO
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rsCtgMrna] ON [b132_SNPContigLocusId_37_1]([locus_id], [contig_acc], [mrna_gi], [snp_id], [asn_from], [allele], [mrna_start])
+GO
+
+ CREATE INDEX [i_rs] ON [b132_SNPContigLocusId_37_1]([snp_id])
+GO
+
+
+ CREATE UNIQUE CLUSTERED INDEX [i_rs] ON [b132_SNPMapInfo_37_1]([snp_id], [assembly])
+GO
+
+
+
+ CREATE CLUSTERED INDEX [i_pid] ON [dn_IND_batch_pop]([pop_id])
+GO
+
+
+
+
+
+
+ CREATE CLUSTERED INDEX [i_b_size] ON [dn_table_rowcount]([build_id] DESC , [reserved_KB_spaceused] DESC )
+GO
+
+
--- /dev/null
+
+ CREATE INDEX ON Batch(tax_id)
+;
+ CREATE INDEX ON Batch(submitted_time)
+;
+ CREATE INDEX ON Batch(handle, loc_batch_id)
+;
+ CREATE INDEX ON Batch(pop_id)
+;
+ CREATE INDEX ON Batch(success_rate_int)
+;
+ CREATE INDEX ON Batch(method_id)
+;
+ CREATE INDEX ON Batch(loc_batch_id_upp)
+;
+ CREATE INDEX ON Batch(last_updated_time)
+;
+
+ CREATE INDEX ON BatchCita(pub_id)
+;
+
+
+ CREATE INDEX ON BatchCultivar(line)
+;
+
+
+ CREATE INDEX ON BatchStrain(line)
+;
+
+
+
+
+
+
+
+
+
+
+
+ CREATE UNIQUE INDEX ON Pedigree(curator, curator_ped_id)
+;
+
+ CREATE UNIQUE INDEX ON PedigreeIndividual(ind_id, ped_id)
+;
+
+
+ CREATE UNIQUE INDEX ON PopMandLine(pop_id, line_num)
+;
+
+ CREATE UNIQUE INDEX ON Population(handle, loc_pop_id_upp)
+;
+ CREATE UNIQUE INDEX ON Population(handle, loc_pop_id)
+;
+
+
+ CREATE UNIQUE INDEX ON SNP(snp_id)
+;
+ CREATE INDEX ON SNP(exemplar_subsnp_id, snp_id)
+;
+
+ CREATE INDEX ON SNP3D(snp_id)
+;
+
+
+
+
+
+ CREATE INDEX ON SNPHistory(history_create_time)
+;
+
+
+ CREATE UNIQUE INDEX ON SNPSubSNPLink(subsnp_id)
+;
+ CREATE INDEX ON SNPSubSNPLink(snp_id, subsnp_id, substrand_reversed_flag)
+;
+
+ CREATE INDEX ON SNPSubSNPLinkHistory(snp_id)
+;
+ CREATE UNIQUE INDEX ON SNPSubSNPLinkHistory(subsnp_id, snp_id)
+;
+ CREATE INDEX ON SNPSubSNPLinkHistory(build_id)
+;
+ CREATE INDEX ON SNPSubSNPLinkHistory(build_id_when_history_made)
+;
+
+ CREATE INDEX ON SNPVal(snp_id)
+;
+
+ CREATE UNIQUE INDEX ON SNP_HGVS(snp_id, hgvs_name)
+;
+
+ CREATE INDEX ON SNP_bitfield(link_prop_b2)
+;
+
+ CREATE INDEX ON SubPop(subsnp_id)
+;
+ CREATE INDEX ON SubPop(pop_id, subsnp_id)
+;
+ CREATE INDEX ON SubPop(subpop_id)
+;
+
+ CREATE UNIQUE INDEX ON SubPopAllele(batch_id, pop_id, subsnp_id, type, allele, other)
+;
+ CREATE INDEX ON SubPopAllele(freq)
+;
+ CREATE INDEX ON SubPopAllele(freq_max)
+;
+ CREATE INDEX ON SubPopAllele(freq_min)
+;
+ CREATE INDEX ON SubPopAllele(subsnp_id)
+;
+ CREATE INDEX ON SubPopAllele(type)
+;
+ CREATE INDEX ON SubPopAllele(last_updated_time)
+;
+ CREATE INDEX ON SubPopAllele(allele_id)
+;
+ CREATE INDEX ON SubPopAllele(subpop_id)
+;
+ CREATE UNIQUE INDEX ON SubPopAllele(subpop_id, type, allele, other)
+;
+
+ CREATE INDEX ON SubPopGty(subpop_id)
+;
+ CREATE INDEX ON SubPopGty(gty_id)
+;
+
+ CREATE INDEX ON SubSNP(loc_snp_id_upp, subsnp_id)
+;
+ CREATE INDEX ON SubSNP(batch_id, subsnp_id)
+;
+
+ CREATE INDEX ON SubSNPAcc_ins(acc_part, acc_type_ind, subsnp_id)
+;
+
+
+
+
+ CREATE INDEX ON SubSNPMdFailLn(subsnp_id)
+;
+
+
+
+ CREATE INDEX ON SubSNPPubmed(pubmed_id)
+;
+
+
+
+
+
+ CREATE UNIQUE INDEX ON SubmittedIndividual(submitted_ind_id)
+;
+ CREATE INDEX ON SubmittedIndividual(ind_id)
+;
+
+
+ CREATE UNIQUE INDEX ON b132_ContigInfo_37_1(contig_name)
+;
+ CREATE INDEX ON b132_ContigInfo_37_1(contig_label)
+;
+ CREATE INDEX ON b132_ContigInfo_37_1(group_term)
+;
+ CREATE UNIQUE INDEX ON b132_ContigInfo_37_1(contig_gi)
+;
+ CREATE INDEX ON b132_ContigInfo_37_1(ctg_id)
+;
+ CREATE INDEX ON b132_ContigInfo_37_1(contig_name, contig_acc)
+;
+
+ CREATE INDEX ON b132_GenomeAssemblyInfo_37_1(rep_order, assembly)
+;
+
+ CREATE INDEX ON b132_MapLinkInfo_37_1(gi)
+;
+
+ CREATE INDEX ON b132_MapLink_37_1(snp_id, gi)
+;
+ CREATE INDEX ON b132_MapLink_37_1(gi, "offset", asn_to)
+;
+
+
+ CREATE UNIQUE INDEX ON b132_SNPChrPosOnRef_37_1(snp_id)
+;
+
+ CREATE UNIQUE INDEX ON b132_SNPContigLoc_37_1(snp_id, ctg_id, asn_from)
+;
+ CREATE INDEX ON b132_SNPContigLoc_37_1(ctg_id, asn_from)
+;
+ CREATE INDEX ON b132_SNPContigLoc_37_1(snp_type, snp_id)
+;
+ CREATE INDEX ON b132_SNPContigLoc_37_1(ctg_id, snp_id)
+;
+
+ CREATE UNIQUE INDEX ON b132_SNPContigLocusId_37_1(locus_id, contig_acc, mrna_gi, snp_id, asn_from, allele, mrna_start)
+;
+ CREATE INDEX ON b132_SNPContigLocusId_37_1(snp_id)
+;
+
+ CREATE UNIQUE INDEX ON b132_SNPMapInfo_37_1(snp_id, assembly)
+;
+
+
+ CREATE INDEX ON dn_IND_batch_pop(pop_id)
+;
+
+
+
+
+
+ CREATE INDEX ON dn_table_rowcount(build_id DESC , reserved_KB_spaceused DESC )
+;
+
--- /dev/null
+CREATE TABLE [AlleleFreqBySsPop] (
+ [subsnp_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [allele_id] [int] NOT NULL ,
+ [source] [varchar] (2) NOT NULL ,
+ [cnt] [real] NULL ,
+ [freq] [real] NULL ,
+ [last_updated_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [Batch] (
+ [batch_id] [int] NOT NULL ,
+ [handle] [varchar] (20) NOT NULL ,
+ [loc_batch_id] [varchar] (64) NOT NULL ,
+ [loc_batch_id_upp] [varchar] (64) NOT NULL ,
+ [batch_type] [char] (3) NOT NULL ,
+ [status] [tinyint] NULL ,
+ [simul_sts_status] [tinyint] NOT NULL ,
+ [moltype] [varchar] (8) NOT NULL ,
+ [method_id] [int] NOT NULL ,
+ [samplesize] [int] NULL ,
+ [synonym_type] [varchar] (255) NULL ,
+ [submitted_time] [smalldatetime] NOT NULL ,
+ [linkout_url] [varchar] (255) NULL ,
+ [pop_id] [int] NULL ,
+ [last_updated_time] [smalldatetime] NULL ,
+ [success_rate_int] [int] NULL ,
+ [build_id] [int] NULL ,
+ [tax_id] [int] NOT NULL ,
+ [ss_cnt] [int] NULL
+)
+GO
+
+
+CREATE TABLE [BatchCita] (
+ [batch_id] [int] NOT NULL ,
+ [position] [int] NOT NULL ,
+ [pub_id] [int] NOT NULL ,
+ [citation] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [BatchCommLine] (
+ [batch_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [BatchCultivar] (
+ [batch_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [BatchMeExLine] (
+ [batch_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [BatchStrain] (
+ [batch_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [BatchValCode] (
+ [batch_id] [int] NOT NULL ,
+ [validation_status] [tinyint] NOT NULL
+)
+GO
+
+
+CREATE TABLE [Contact] (
+ [batch_id] [int] NOT NULL ,
+ [handle] [varchar] (20) NOT NULL ,
+ [name] [varchar] (255) NOT NULL ,
+ [fax] [varchar] (255) NULL ,
+ [phone] [varchar] (255) NULL ,
+ [email] [varchar] (255) NULL ,
+ [lab] [varchar] (255) NULL ,
+ [institution] [varchar] (255) NULL ,
+ [address] [varchar] (255) NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [FreqSummaryBySsPop] (
+ [subsnp_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [source] [varchar] (1) NOT NULL ,
+ [chr_cnt] [int] NOT NULL ,
+ [ind_cnt] [int] NOT NULL ,
+ [non_founder_ind_cnt] [int] NOT NULL ,
+ [chisq] [real] NULL ,
+ [df] [tinyint] NULL ,
+ [hwp] [real] NULL ,
+ [het] [real] NULL ,
+ [het_se] [real] NULL ,
+ [last_updated_time] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [GeneIdToName] (
+ [gene_id] [int] NOT NULL ,
+ [gene_symbol] [varchar] (64) NOT NULL ,
+ [gene_name] [varchar] (255) NULL ,
+ [gene_type] [varchar] (255) NULL ,
+ [tax_id] [int] NOT NULL ,
+ [last_update_time] [smalldatetime] NOT NULL ,
+ [ref_tax_id] [int] NOT NULL ,
+ [dbSNP_tax_id] [int] NOT NULL ,
+ [ins_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [GtyFreqBySsPop] (
+ [subsnp_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [unigty_id] [int] NOT NULL ,
+ [source] [varchar] (1) NULL ,
+ [cnt] [real] NULL ,
+ [freq] [real] NULL ,
+ [last_updated_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [IndGrpCode] (
+ [code] [tinyint] NOT NULL ,
+ [name] [varchar] (32) NOT NULL ,
+ [descrip] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [IndivBySource] (
+ [ind_id] [int] NOT NULL ,
+ [src_id] [int] NOT NULL ,
+ [src_ind_id] [varchar] (64) NOT NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [src_ind_grp] [varchar] (64) NULL
+)
+GO
+
+
+CREATE TABLE [IndivSourceCode] (
+ [code] [int] NOT NULL ,
+ [name] [varchar] (22) NOT NULL ,
+ [descrip] [varchar] (255) NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [src_type] [varchar] (10) NULL ,
+ [display_order] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [Individual] (
+ [ind_id] [int] NOT NULL ,
+ [descrip] [varchar] (255) NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [tax_id] [int] NULL ,
+ [ind_grp] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [OmimVarLocusIdSNP] (
+ [omim_id] [int] NOT NULL ,
+ [locus_id] [int] NULL ,
+ [omimvar_id] [char] (4) NULL ,
+ [locus_symbol] [char] (10) NULL ,
+ [var1] [char] (20) NULL ,
+ [aa_position] [int] NULL ,
+ [var2] [char] (20) NULL ,
+ [var_class] [int] NOT NULL ,
+ [snp_id] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [Pedigree] (
+ [ped_id] [numeric](7, 0) NOT NULL ,
+ [curator] [varchar] (12) NOT NULL ,
+ [curator_ped_id] [varchar] (12) NOT NULL ,
+ [create_time] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [PedigreeIndividual] (
+ [ped_id] [decimal](7, 0) NOT NULL ,
+ [ind_id] [int] NOT NULL ,
+ [ma_ind_id] [int] NULL ,
+ [pa_ind_id] [int] NULL ,
+ [sex] [char] (1) NULL ,
+ [create_time] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [PopLine] (
+ [pop_id] [int] NOT NULL ,
+ [line_num] [int] NOT NULL ,
+ [line] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [PopMandLine] (
+ [pop_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [Population] (
+ [pop_id] [int] NOT NULL ,
+ [handle] [varchar] (20) NOT NULL ,
+ [loc_pop_id] [varchar] (64) NOT NULL ,
+ [loc_pop_id_upp] [varchar] (64) NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL ,
+ [src_id] [int] NULL
+)
+GO
+
+
+CREATE TABLE [RsMergeArch] (
+ [rsHigh] [int] NULL ,
+ [rsLow] [int] NULL ,
+ [build_id] [int] NULL ,
+ [orien] [tinyint] NULL ,
+ [create_time] [datetime] NOT NULL ,
+ [last_updated_time] [datetime] NOT NULL ,
+ [rsCurrent] [int] NULL ,
+ [orien2Current] [tinyint] NULL ,
+ [comment] [varchar] (255) NULL
+)
+GO
+
+
+CREATE TABLE [SNP] (
+ [snp_id] [int] NULL ,
+ [avg_heterozygosity] [real] NULL ,
+ [het_se] [real] NULL ,
+ [create_time] [datetime] NULL ,
+ [last_updated_time] [datetime] NULL ,
+ [CpG_code] [tinyint] NULL ,
+ [tax_id] [int] NULL ,
+ [validation_status] [tinyint] NULL ,
+ [exemplar_subsnp_id] [int] NULL ,
+ [univar_id] [int] NULL ,
+ [cnt_subsnp] [int] NULL ,
+ [map_property] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [SNP3D] (
+ [snp_id] [int] NOT NULL ,
+ [protein_acc] [char] (50) NOT NULL ,
+ [master_gi] [int] NOT NULL ,
+ [neighbor_gi] [int] NOT NULL ,
+ [aa_position] [int] NOT NULL ,
+ [var_res] [char] (1) NOT NULL ,
+ [contig_res] [char] (1) NOT NULL ,
+ [neighbor_res] [char] (1) NOT NULL ,
+ [neighbor_pos] [int] NOT NULL ,
+ [var_color] [int] NOT NULL ,
+ [var_label] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNPAlleleFreq] (
+ [snp_id] [int] NOT NULL ,
+ [allele_id] [int] NOT NULL ,
+ [chr_cnt] [float] NULL ,
+ [freq] [float] NULL ,
+ [last_updated_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNPAncestralAllele] (
+ [snp_id] [int] NOT NULL ,
+ [ancestral_allele_id] [int] NOT NULL ,
+ [batch_id] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNPGtyFreq] (
+ [snp_id] [int] NOT NULL ,
+ [unigty_id] [int] NOT NULL ,
+ [ind_cnt] [float] NULL ,
+ [freq] [float] NULL ,
+ [last_updated_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNPHWProb] (
+ [snp_id] [int] NOT NULL ,
+ [df] [tinyint] NULL ,
+ [chisq] [real] NULL ,
+ [hwp] [real] NULL ,
+ [ind_cnt] [smallint] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [SNPHistory] (
+ [snp_id] [int] NOT NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NOT NULL ,
+ [history_create_time] [smalldatetime] NULL ,
+ [comment] [varchar] (255) NULL
+)
+GO
+
+
+CREATE TABLE [SNPPubmed] (
+ [snp_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [pubmed_id] [int] NOT NULL ,
+ [type] [varchar] (16) NOT NULL ,
+ [score] [int] NOT NULL ,
+ [upd_date] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNPSubSNPLink] (
+ [subsnp_id] [int] NULL ,
+ [snp_id] [int] NULL ,
+ [substrand_reversed_flag] [tinyint] NULL ,
+ [create_time] [datetime] NULL ,
+ [last_updated_time] [datetime] NULL ,
+ [build_id] [int] NULL ,
+ [comment] [varchar] (255) NULL
+)
+GO
+
+
+CREATE TABLE [SNPSubSNPLinkHistory] (
+ [subsnp_id] [int] NULL ,
+ [snp_id] [int] NULL ,
+ [build_id] [int] NULL ,
+ [history_create_time] [datetime] NOT NULL ,
+ [link_create_time] [datetime] NULL ,
+ [link_last_updated_time] [datetime] NULL ,
+ [orien] [tinyint] NULL ,
+ [build_id_when_history_made] [int] NULL ,
+ [comment] [varchar] (255) NULL
+)
+GO
+
+
+CREATE TABLE [SNPVal] (
+ [batch_id] [int] NOT NULL ,
+ [snp_id] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNP_HGVS] (
+ [snp_id] [int] NULL ,
+ [hgvs_name] [varchar] (256) NULL ,
+ [source] [varchar] (8) NOT NULL ,
+ [upd_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SNP_bitfield] (
+ [snp_id] [int] NOT NULL ,
+ [ver_code] [tinyint] NULL ,
+ [link_prop_b1] [tinyint] NULL ,
+ [link_prop_b2] [tinyint] NULL ,
+ [gene_prop_b1] [tinyint] NULL ,
+ [gene_prop_b2] [tinyint] NULL ,
+ [map_prop] [tinyint] NULL ,
+ [freq_prop] [tinyint] NULL ,
+ [gty_prop] [tinyint] NULL ,
+ [hapmap_prop] [tinyint] NULL ,
+ [pheno_prop] [tinyint] NULL ,
+ [variation_class] [tinyint] NOT NULL ,
+ [quality_check] [tinyint] NULL ,
+ [upd_time] [datetime] NOT NULL ,
+ [encoding] [binary] (12) NULL
+)
+GO
+
+
+CREATE TABLE [SubPop] (
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [type] [char] (3) NOT NULL ,
+ [samplesize] [int] NOT NULL ,
+ [submitted_strand_code] [tinyint] NULL ,
+ [submitted_rs] [int] NULL ,
+ [allele_flag] [tinyint] NULL ,
+ [ambiguity_status] [tinyint] NULL ,
+ [sub_heterozygosity] [real] NULL ,
+ [est_heterozygosity] [real] NULL ,
+ [est_het_se_sq] [real] NULL ,
+ [last_updated_time] [smalldatetime] NOT NULL ,
+ [observed] [varchar] (1000) NULL ,
+ [sub_het_se_sq] [real] NULL ,
+ [subpop_id] [int] IDENTITY (1, 1) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubPopAllele] (
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [allele] [char] (1) NOT NULL ,
+ [other] [varchar] (255) NULL ,
+ [freq] [real] NULL ,
+ [cnt_int] [int] NULL ,
+ [freq_min] [real] NULL ,
+ [freq_max] [real] NULL ,
+ [data_src] [varchar] (6) NULL ,
+ [type] [char] (3) NULL ,
+ [last_updated_time] [smalldatetime] NULL ,
+ [allele_flag] [tinyint] NULL ,
+ [cnt] [real] NULL ,
+ [allele_id] [int] NULL ,
+ [subpop_id] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubPopGty] (
+ [subpop_id] [int] NOT NULL ,
+ [gty_id] [int] NOT NULL ,
+ [gty_str] [varchar] (255) NULL ,
+ [cnt] [real] NULL ,
+ [freq] [real] NULL ,
+ [last_updated_time] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNP] (
+ [subsnp_id] [int] NOT NULL ,
+ [known_snp_handle] [varchar] (20) NULL ,
+ [known_snp_loc_id] [varchar] (64) NULL ,
+ [known_snp_loc_id_upp] [varchar] (64) NULL ,
+ [batch_id] [int] NOT NULL ,
+ [loc_snp_id] [varchar] (64) NULL ,
+ [loc_snp_id_upp] [varchar] (64) NULL ,
+ [synonym_names] [varchar] (255) NULL ,
+ [loc_sts_id] [varchar] (64) NULL ,
+ [loc_sts_id_upp] [varchar] (64) NULL ,
+ [segregate] [char] (1) NOT NULL ,
+ [indiv_homozygosity_detected] [char] (1) NULL ,
+ [PCR_confirmed_ind] [char] (1) NULL ,
+ [gene_name] [varchar] (64) NULL ,
+ [sequence_len] [int] NULL ,
+ [samplesize] [int] NULL ,
+ [EXPRESSED_SEQUENCE_ind] [char] (1) NULL ,
+ [SOMATIC_ind] [char] (1) NULL ,
+ [sub_locus_id] [int] NULL ,
+ [create_time] [smalldatetime] NULL ,
+ [last_updated_time] [smalldatetime] NULL ,
+ [ancestral_allele] [varchar] (255) NULL ,
+ [CpG_code] [tinyint] NULL ,
+ [variation_id] [int] NULL ,
+ [top_or_bot_strand] [char] (1) NULL ,
+ [validation_status] [tinyint] NULL ,
+ [snp_id] [int] NULL ,
+ [tax_id] [int] NOT NULL ,
+ [chr_id] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPAcc_ins] (
+ [subsnp_id] [int] NOT NULL ,
+ [acc_type_ind] [char] (1) NOT NULL ,
+ [acc_part] [varchar] (16) NOT NULL ,
+ [acc_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPCommLine_ins] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPHGVS] (
+ [subsnp_id] [int] NOT NULL ,
+ [sub_hgvs_c] [varchar] (32) NULL ,
+ [sub_hgvs_g] [varchar] (32) NULL ,
+ [sub_hgvs_p] [varchar] (32) NULL ,
+ [cal_hgvs_c] [varchar] (32) NULL ,
+ [cal_hgvs_g] [varchar] (32) NULL ,
+ [cal_hgvs_p] [varchar] (32) NULL ,
+ [upd_time] [smalldatetime] NULL ,
+ [gene_id] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPLinkout] (
+ [subsnp_id] [int] NOT NULL ,
+ [url_val] [varchar] (255) NOT NULL ,
+ [updated_time] [smalldatetime] NULL ,
+ [link_type] [varchar] (3) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPMdFailLn] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPNoVariSeq] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPOmim] (
+ [subsnp_id] [int] NOT NULL ,
+ [omim_id] [int] NOT NULL ,
+ [allele_variant_id] [varchar] (32) NULL ,
+ [update_time] [smalldatetime] NULL ,
+ [mutObsCount] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPPubmed] (
+ [subsnp_id] [int] NOT NULL ,
+ [line_num] [int] NOT NULL ,
+ [pubmed_id] [int] NOT NULL ,
+ [updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq3_ins] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeq5_ins] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [tinyint] NOT NULL ,
+ [line_num] [tinyint] NOT NULL ,
+ [line] [varchar] (255) NOT NULL
+)
+GO
+
+
+CREATE TABLE [SubSNPSeqPos] (
+ [subsnp_id] [int] NOT NULL ,
+ [contig_acc] [varchar] (20) NOT NULL ,
+ [contig_pos] [int] NOT NULL ,
+ [chr] [varchar] (2) NULL ,
+ [upstream_len] [int] NOT NULL ,
+ [downstream_len] [int] NOT NULL ,
+ [last_update_time] [smalldatetime] NOT NULL ,
+ [mrna_acc] [varchar] (24) NULL
+)
+GO
+
+
+CREATE TABLE [SubSNP_top_or_bot] (
+ [subsnp_id] [int] NOT NULL ,
+ [top_or_bot] [char] (1) NULL ,
+ [step] [tinyint] NULL ,
+ [last_updated_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [SubmittedIndividual] (
+ [submitted_ind_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [loc_ind_id_upp] [varchar] (64) NOT NULL ,
+ [ind_id] [int] NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [last_updated_time] [smalldatetime] NULL ,
+ [tax_id] [int] NOT NULL ,
+ [loc_ind_alias] [varchar] (64) NULL ,
+ [loc_ind_id] [varchar] (64) NULL ,
+ [loc_ind_grp] [varchar] (64) NULL ,
+ [ploidy] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [Synonym] (
+ [subsnp_id] [int] NOT NULL ,
+ [type] [varchar] (64) NOT NULL ,
+ [name] [varchar] (64) NULL
+)
+GO
+
+
+CREATE TABLE [b132_ContigInfo_37_1] (
+ [ctg_id] [int] NOT NULL ,
+ [tax_id] [int] NOT NULL ,
+ [contig_acc] [varchar] (32) NOT NULL ,
+ [contig_ver] [tinyint] NULL ,
+ [contig_name] [varchar] (32) NOT NULL ,
+ [contig_chr] [varchar] (32) NULL ,
+ [contig_start] [int] NULL ,
+ [contig_end] [int] NULL ,
+ [orient] [tinyint] NULL ,
+ [contig_gi] [int] NULL ,
+ [group_term] [varchar] (32) NULL ,
+ [group_label] [varchar] (32) NULL ,
+ [contig_label] [varchar] (32) NULL ,
+ [build_id] [int] NULL ,
+ [build_ver] [int] NULL ,
+ [last_updated_time] [datetime] NOT NULL ,
+ [placement_status] [tinyint] NOT NULL
+)
+GO
+
+
+CREATE TABLE [b132_GenomeAssemblyInfo_37_1] (
+ [assembly] [varchar] (32) NOT NULL ,
+ [assembly_type] [varchar] (8) NOT NULL ,
+ [rep_order] [tinyint] NULL ,
+ [comment] [varchar] (255) NULL ,
+ [upd_time] [smalldatetime] NULL
+)
+GO
+
+
+CREATE TABLE [b132_MapLinkInfo_37_1] (
+ [gi] [int] NULL ,
+ [accession] [varchar] (127) NULL ,
+ [accession_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [b132_MapLink_37_1] (
+ [snp_type] [char] (2) NOT NULL ,
+ [snp_id] [int] NULL ,
+ [gi] [int] NOT NULL ,
+ [accession_how_cd] [int] NULL ,
+ [offset] [int] NULL ,
+ [asn_to] [int] NULL ,
+ [lf_ngbr] [int] NULL ,
+ [rf_ngbr] [int] NULL ,
+ [lc_ngbr] [int] NULL ,
+ [rc_ngbr] [int] NULL ,
+ [loc_type] [tinyint] NULL ,
+ [build_id] [int] NULL ,
+ [process_time] [datetime] NULL ,
+ [process_status] [int] NULL ,
+ [orientation] [int] NULL ,
+ [allele] [varchar] (1024) NULL ,
+ [aln_quality] [float] NULL ,
+ [num_mism] [int] NULL ,
+ [num_ins] [int] NULL ,
+ [num_del] [int] NULL ,
+ [tier] [int] NULL ,
+ [ctg_gi] [int] NULL ,
+ [ctg_from] [int] NULL ,
+ [ctg_to] [int] NULL ,
+ [ctg_orient] [tinyint] NULL ,
+ [source] [varchar] (5) NOT NULL
+)
+GO
+
+
+CREATE TABLE [b132_ProteinInfo_37_1] (
+ [prot_gi] [int] NULL ,
+ [prot_acc] [varchar] (128) NULL ,
+ [prot_ver] [int] NULL
+)
+GO
+
+
+CREATE TABLE [b132_SNPChrPosOnRef_37_1] (
+ [snp_id] [int] NULL ,
+ [chr] [varchar] (32) NULL ,
+ [pos] [int] NULL ,
+ [orien] [int] NULL ,
+ [neighbor_snp_list] [int] NULL ,
+ [isPAR] [varchar] (1) NOT NULL
+)
+GO
+
+
+CREATE TABLE [b132_SNPContigLoc_37_1] (
+ [snp_type] [char] (2) NOT NULL ,
+ [snp_id] [int] NOT NULL ,
+ [ctg_id] [int] NOT NULL ,
+ [asn_from] [int] NOT NULL ,
+ [asn_to] [int] NOT NULL ,
+ [lf_ngbr] [int] NULL ,
+ [rf_ngbr] [int] NULL ,
+ [lc_ngbr] [int] NOT NULL ,
+ [rc_ngbr] [int] NOT NULL ,
+ [loc_type] [tinyint] NOT NULL ,
+ [phys_pos_from] [int] NULL ,
+ [snp_bld_id] [int] NOT NULL ,
+ [last_updated_time] [datetime] NOT NULL ,
+ [process_status] [int] NOT NULL ,
+ [orientation] [tinyint] NULL ,
+ [allele] [varchar] (1024) NULL ,
+ [loc_sts_uid] [int] NULL ,
+ [aln_quality] [float] NULL ,
+ [num_mism] [int] NULL ,
+ [num_del] [int] NULL ,
+ [num_ins] [int] NULL ,
+ [tier] [tinyint] NULL
+)
+GO
+
+
+CREATE TABLE [b132_SNPContigLocusId_37_1] (
+ [snp_id] [int] NULL ,
+ [contig_acc] [varchar] (32) NULL ,
+ [contig_ver] [tinyint] NULL ,
+ [asn_from] [int] NULL ,
+ [asn_to] [int] NULL ,
+ [locus_id] [int] NULL ,
+ [locus_symbol] [varchar] (128) NULL ,
+ [mrna_acc] [varchar] (128) NULL ,
+ [mrna_ver] [int] NULL ,
+ [protein_acc] [varchar] (128) NULL ,
+ [protein_ver] [int] NULL ,
+ [fxn_class] [int] NULL ,
+ [reading_frame] [int] NULL ,
+ [allele] [varchar] (256) NULL ,
+ [residue] [varchar] (1024) NULL ,
+ [aa_position] [int] NULL ,
+ [build_id] [varchar] (4) NOT NULL ,
+ [ctg_id] [int] NULL ,
+ [mrna_start] [int] NULL ,
+ [mrna_stop] [int] NULL ,
+ [codon] [varchar] (1024) NULL ,
+ [protRes] [char] (3) NULL ,
+ [contig_gi] [int] NULL ,
+ [mrna_gi] [int] NULL ,
+ [mrna_orien] [tinyint] NULL ,
+ [cp_mrna_ver] [int] NULL ,
+ [cp_mrna_gi] [int] NULL ,
+ [verComp] [varchar] (7) NOT NULL
+)
+GO
+
+
+CREATE TABLE [b132_SNPMapInfo_37_1] (
+ [snp_type] [char] (2) NOT NULL ,
+ [snp_id] [int] NOT NULL ,
+ [chr_cnt] [int] NOT NULL ,
+ [contig_cnt] [int] NOT NULL ,
+ [loc_cnt] [int] NOT NULL ,
+ [weight] [int] NOT NULL ,
+ [hap_cnt] [int] NOT NULL ,
+ [placed_cnt] [int] NOT NULL ,
+ [grouped_cnt] [int] NOT NULL ,
+ [unplaced_cnt] [int] NOT NULL ,
+ [md5] [char] (32) NULL ,
+ [assembly] [varchar] (32) NULL
+)
+GO
+
+
+CREATE TABLE [dn_IND_batchCount] (
+ [batch_id] [int] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [ss_cnt] [int] NOT NULL ,
+ [rs_cnt] [int] NOT NULL ,
+ [ind_cnt] [int] NOT NULL ,
+ [create_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_IND_batch_pop] (
+ [batch_id] [smallint] NOT NULL ,
+ [pop_id] [int] NOT NULL ,
+ [update_time] [datetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_PopulationIndGrp] (
+ [pop_id] [int] NOT NULL ,
+ [ind_grp_name] [varchar] (32) NOT NULL ,
+ [ind_grp_code] [tinyint] NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_batchCount] (
+ [batch_id] [int] NOT NULL ,
+ [ss_cnt] [int] NOT NULL ,
+ [rs_cnt] [int] NOT NULL ,
+ [rs_validated_cnt] [int] NOT NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [pop_cnt] [int] NULL ,
+ [ind_cnt] [int] NULL
+)
+GO
+
+
+CREATE TABLE [dn_handleCount] (
+ [handle] [varchar] (20) NOT NULL ,
+ [batch_type] [char] (3) NOT NULL ,
+ [ss_cnt] [int] NOT NULL ,
+ [rs_cnt] [int] NULL ,
+ [rs_validated_cnt] [int] NULL ,
+ [create_time] [smalldatetime] NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_snpFxnCnt] (
+ [build_id] [int] NOT NULL ,
+ [fxn_class] [tinyint] NULL ,
+ [snp_cnt] [int] NOT NULL ,
+ [gene_cnt] [int] NOT NULL ,
+ [create_time] [smalldatetime] NOT NULL ,
+ [last_updated_time] [smalldatetime] NOT NULL ,
+ [tax_id] [int] NOT NULL
+)
+GO
+
+
+CREATE TABLE [dn_table_rowcount] (
+ [tabname] [varchar] (64) NOT NULL ,
+ [row_cnt] [int] NOT NULL ,
+ [build_id] [int] NOT NULL ,
+ [update_time] [datetime] NOT NULL ,
+ [rows_in_spaceused] [int] NULL ,
+ [reserved_KB_spaceused] [int] NULL ,
+ [data_KB_spaceused] [int] NULL ,
+ [index_size_KB_spaceused] [int] NULL ,
+ [unused_KB_spaceused] [int] NULL
+)
+GO
+
+
--- /dev/null
+CREATE TABLE AlleleFreqBySsPop (
+ subsnp_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ allele_id int NOT NULL ,
+ source varchar (2) NOT NULL ,
+ cnt real NULL ,
+ freq real NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE Batch (
+ batch_id int NOT NULL ,
+ handle varchar (20) NOT NULL ,
+ loc_batch_id varchar (64) NOT NULL ,
+ loc_batch_id_upp varchar (64) NOT NULL ,
+ batch_type char (3) NOT NULL ,
+ status smallint NULL ,
+ simul_sts_status smallint NOT NULL ,
+ moltype varchar (8) NOT NULL ,
+ method_id int NOT NULL ,
+ samplesize int NULL ,
+ synonym_type varchar (255) NULL ,
+ submitted_time TIMESTAMP NOT NULL ,
+ linkout_url varchar (255) NULL ,
+ pop_id int NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ success_rate_int int NULL ,
+ build_id int NULL ,
+ tax_id int NOT NULL ,
+ ss_cnt int NULL
+)
+;
+
+CREATE TABLE BatchCita (
+ batch_id int NOT NULL ,
+ position int NOT NULL ,
+ pub_id int NOT NULL ,
+ citation varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE BatchCommLine (
+ batch_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE BatchCultivar (
+ batch_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE BatchMeExLine (
+ batch_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE BatchStrain (
+ batch_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE BatchValCode (
+ batch_id int NOT NULL ,
+ validation_status smallint NOT NULL
+)
+;
+
+CREATE TABLE Contact (
+ batch_id int NOT NULL ,
+ handle varchar (20) NOT NULL ,
+ name varchar (255) NOT NULL ,
+ fax varchar (255) NULL ,
+ phone varchar (255) NULL ,
+ email varchar (255) NULL ,
+ lab varchar (255) NULL ,
+ institution varchar (255) NULL ,
+ address varchar (255) NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE FreqSummaryBySsPop (
+ subsnp_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ source varchar (1) NOT NULL ,
+ chr_cnt int NOT NULL ,
+ ind_cnt int NOT NULL ,
+ non_founder_ind_cnt int NOT NULL ,
+ chisq real NULL ,
+ df smallint NULL ,
+ hwp real NULL ,
+ het real NULL ,
+ het_se real NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE GeneIdToName (
+ gene_id int NOT NULL ,
+ gene_symbol varchar (64) NOT NULL ,
+ gene_name varchar (255) NULL ,
+ gene_type varchar (255) NULL ,
+ tax_id int NOT NULL ,
+ last_update_time TIMESTAMP NOT NULL ,
+ ref_tax_id int NOT NULL ,
+ dbSNP_tax_id int NOT NULL ,
+ ins_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE GtyFreqBySsPop (
+ subsnp_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ unigty_id int NOT NULL ,
+ source varchar (1) NULL ,
+ cnt real NULL ,
+ freq real NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE IndGrpCode (
+ code smallint NOT NULL ,
+ name varchar (32) NOT NULL ,
+ descrip varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE IndivBySource (
+ ind_id int NOT NULL ,
+ src_id int NOT NULL ,
+ src_ind_id varchar (64) NOT NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ src_ind_grp varchar (64) NULL
+)
+;
+
+CREATE TABLE IndivSourceCode (
+ code int NOT NULL ,
+ name varchar (22) NOT NULL ,
+ descrip varchar (255) NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ src_type varchar (10) NULL ,
+ display_order smallint NULL
+)
+;
+
+CREATE TABLE Individual (
+ ind_id int NOT NULL ,
+ descrip varchar (255) NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ tax_id int NULL ,
+ ind_grp smallint NULL
+)
+;
+
+CREATE TABLE OmimVarLocusIdSNP (
+ omim_id int NOT NULL ,
+ locus_id int NULL ,
+ omimvar_id char (4) NULL ,
+ locus_symbol char (10) NULL ,
+ var1 char (20) NULL ,
+ aa_position int NULL ,
+ var2 char (20) NULL ,
+ var_class int NOT NULL ,
+ snp_id int NOT NULL
+)
+;
+
+CREATE TABLE Pedigree (
+ ped_id numeric(7, 0) NOT NULL ,
+ curator varchar (12) NOT NULL ,
+ curator_ped_id varchar (12) NOT NULL ,
+ create_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE PedigreeIndividual (
+ ped_id decimal(7, 0) NOT NULL ,
+ ind_id int NOT NULL ,
+ ma_ind_id int NULL ,
+ pa_ind_id int NULL ,
+ sex char (1) NULL ,
+ create_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE PopLine (
+ pop_id int NOT NULL ,
+ line_num int NOT NULL ,
+ line varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE PopMandLine (
+ pop_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE Population (
+ pop_id int NOT NULL ,
+ handle varchar (20) NOT NULL ,
+ loc_pop_id varchar (64) NOT NULL ,
+ loc_pop_id_upp varchar (64) NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ src_id int NULL
+)
+;
+
+CREATE TABLE RsMergeArch (
+ rsHigh int NULL ,
+ rsLow int NULL ,
+ build_id int NULL ,
+ orien smallint NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ last_updated_time TIMESTAMP NOT NULL ,
+ rsCurrent int NULL ,
+ orien2Current smallint NULL ,
+ comment varchar (255) NULL
+)
+;
+
+CREATE TABLE SNP (
+ snp_id int NULL ,
+ avg_heterozygosity real NULL ,
+ het_se real NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ CpG_code smallint NULL ,
+ tax_id int NULL ,
+ validation_status smallint NULL ,
+ exemplar_subsnp_id int NULL ,
+ univar_id int NULL ,
+ cnt_subsnp int NULL ,
+ map_property smallint NULL
+)
+;
+
+CREATE TABLE SNP3D (
+ snp_id int NOT NULL ,
+ protein_acc char (50) NOT NULL ,
+ master_gi int NOT NULL ,
+ neighbor_gi int NOT NULL ,
+ aa_position int NOT NULL ,
+ var_res char (1) NOT NULL ,
+ contig_res char (1) NOT NULL ,
+ neighbor_res char (1) NOT NULL ,
+ neighbor_pos int NOT NULL ,
+ var_color int NOT NULL ,
+ var_label int NOT NULL
+)
+;
+
+CREATE TABLE SNPAlleleFreq (
+ snp_id int NOT NULL ,
+ allele_id int NOT NULL ,
+ chr_cnt float NULL ,
+ freq float NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE SNPAncestralAllele (
+ snp_id int NOT NULL ,
+ ancestral_allele_id int NOT NULL ,
+ batch_id int DEFAULT 0 NOT NULL
+)
+;
+
+CREATE TABLE SNPGtyFreq (
+ snp_id int NOT NULL ,
+ unigty_id int NOT NULL ,
+ ind_cnt float NULL ,
+ freq float NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE SNPHWProb (
+ snp_id int NOT NULL ,
+ df smallint NULL ,
+ chisq real NULL ,
+ hwp real NULL ,
+ ind_cnt smallint NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE SNPHistory (
+ snp_id int NOT NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NOT NULL ,
+ history_create_time TIMESTAMP NULL ,
+ comment varchar (255) NULL
+)
+;
+
+CREATE TABLE SNPPubmed (
+ snp_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ pubmed_id int NOT NULL ,
+ type varchar (16) NOT NULL ,
+ score int NOT NULL ,
+ upd_date TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE SNPSubSNPLink (
+ subsnp_id int NULL ,
+ snp_id int NULL ,
+ substrand_reversed_flag smallint NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ build_id int NULL ,
+ comment varchar (255) NULL
+)
+;
+
+CREATE TABLE SNPSubSNPLinkHistory (
+ subsnp_id int NULL ,
+ snp_id int NULL ,
+ build_id int NULL ,
+ history_create_time TIMESTAMP NOT NULL ,
+ link_create_time TIMESTAMP NULL ,
+ link_last_updated_time TIMESTAMP NULL ,
+ orien smallint NULL ,
+ build_id_when_history_made int NULL ,
+ comment varchar (255) NULL
+)
+;
+
+CREATE TABLE SNPVal (
+ batch_id int NOT NULL ,
+ snp_id int NOT NULL
+)
+;
+
+CREATE TABLE SNP_HGVS (
+ snp_id int NULL ,
+ hgvs_name varchar (256) NULL ,
+ source varchar (8) NOT NULL ,
+ upd_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE SNP_bitfield (
+ snp_id int NOT NULL ,
+ ver_code smallint NULL ,
+ link_prop_b1 smallint NULL ,
+ link_prop_b2 smallint NULL ,
+ gene_prop_b1 smallint NULL ,
+ gene_prop_b2 smallint NULL ,
+ map_prop smallint NULL ,
+ freq_prop smallint NULL ,
+ gty_prop smallint NULL ,
+ hapmap_prop smallint NULL ,
+ pheno_prop smallint NULL ,
+ variation_class smallint NOT NULL ,
+ quality_check smallint NULL ,
+ upd_time TIMESTAMP NOT NULL ,
+ encoding bytea NULL
+)
+;
+
+CREATE TABLE SubPop (
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ type char (3) NOT NULL ,
+ samplesize int NOT NULL ,
+ submitted_strand_code smallint NULL ,
+ submitted_rs int NULL ,
+ allele_flag smallint NULL ,
+ ambiguity_status smallint NULL ,
+ sub_heterozygosity real NULL ,
+ est_heterozygosity real NULL ,
+ est_het_se_sq real NULL ,
+ last_updated_time TIMESTAMP DEFAULT NOW() NOT NULL ,
+ observed varchar (1000) NULL ,
+ sub_het_se_sq real NULL ,
+ subpop_id SERIAL NOT NULL
+)
+;
+
+CREATE TABLE SubPopAllele (
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ allele char (1) NOT NULL ,
+ other varchar (255) NULL ,
+ freq real NULL ,
+ cnt_int int NULL ,
+ freq_min real NULL ,
+ freq_max real NULL ,
+ data_src varchar (6) NULL ,
+ type char (3) NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ allele_flag smallint NULL ,
+ cnt real NULL ,
+ allele_id int NULL ,
+ subpop_id int NOT NULL
+)
+;
+
+CREATE TABLE SubPopGty (
+ subpop_id int NOT NULL ,
+ gty_id int NOT NULL ,
+ gty_str varchar (255) NULL ,
+ cnt real NULL ,
+ freq real NULL ,
+ last_updated_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE SubSNP (
+ subsnp_id int NOT NULL ,
+ known_snp_handle varchar (20) NULL ,
+ known_snp_loc_id varchar (64) NULL ,
+ known_snp_loc_id_upp varchar (64) NULL ,
+ batch_id int NOT NULL ,
+ loc_snp_id varchar (64) NULL ,
+ loc_snp_id_upp varchar (64) NULL ,
+ synonym_names varchar (255) NULL ,
+ loc_sts_id varchar (64) NULL ,
+ loc_sts_id_upp varchar (64) NULL ,
+ segregate char (1) NOT NULL ,
+ indiv_homozygosity_detected char (1) NULL ,
+ PCR_confirmed_ind char (1) NULL ,
+ gene_name varchar (64) NULL ,
+ sequence_len int NULL ,
+ samplesize int NULL ,
+ EXPRESSED_SEQUENCE_ind char (1) NULL ,
+ SOMATIC_ind char (1) NULL ,
+ sub_locus_id int NULL ,
+ create_time TIMESTAMP NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ ancestral_allele varchar (255) NULL ,
+ CpG_code smallint NULL ,
+ variation_id int NULL ,
+ top_or_bot_strand char (1) NULL ,
+ validation_status smallint NULL ,
+ snp_id int NULL ,
+ tax_id int NOT NULL ,
+ chr_id smallint NULL
+)
+;
+
+CREATE TABLE SubSNPAcc_ins (
+ subsnp_id int NOT NULL ,
+ acc_type_ind char (1) NOT NULL ,
+ acc_part varchar (16) NOT NULL ,
+ acc_ver int NULL
+)
+;
+
+CREATE TABLE SubSNPCommLine_ins (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPHGVS (
+ subsnp_id int NOT NULL ,
+ sub_hgvs_c varchar (32) NULL ,
+ sub_hgvs_g varchar (32) NULL ,
+ sub_hgvs_p varchar (32) NULL ,
+ cal_hgvs_c varchar (32) NULL ,
+ cal_hgvs_g varchar (32) NULL ,
+ cal_hgvs_p varchar (32) NULL ,
+ upd_time TIMESTAMP NULL ,
+ gene_id int NULL
+)
+;
+
+CREATE TABLE SubSNPLinkout (
+ subsnp_id int NOT NULL ,
+ url_val varchar (255) NOT NULL ,
+ updated_time TIMESTAMP NULL ,
+ link_type varchar (3) DEFAULT 'NA' NOT NULL
+)
+;
+
+CREATE TABLE SubSNPMdFailLn (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPNoVariSeq (
+ subsnp_id int NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPOmim (
+ subsnp_id int NOT NULL ,
+ omim_id int NOT NULL ,
+ allele_variant_id varchar (32) NULL ,
+ update_time TIMESTAMP NULL ,
+ mutObsCount int NULL
+)
+;
+
+CREATE TABLE SubSNPPubmed (
+ subsnp_id int NOT NULL ,
+ line_num int NOT NULL ,
+ pubmed_id int NOT NULL ,
+ updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE SubSNPSeq3_ins (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeq5_ins (
+ subsnp_id int NOT NULL ,
+ type smallint NOT NULL ,
+ line_num smallint NOT NULL ,
+ line varchar (255) NOT NULL
+)
+;
+
+CREATE TABLE SubSNPSeqPos (
+ subsnp_id int NOT NULL ,
+ contig_acc varchar (20) NOT NULL ,
+ contig_pos int NOT NULL ,
+ chr varchar (2) NULL ,
+ upstream_len int NOT NULL ,
+ downstream_len int NOT NULL ,
+ last_update_time TIMESTAMP NOT NULL ,
+ mrna_acc varchar (24) NULL
+)
+;
+
+CREATE TABLE SubSNP_top_or_bot (
+ subsnp_id int NOT NULL ,
+ top_or_bot char (1) NULL ,
+ step smallint NULL ,
+ last_updated_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE SubmittedIndividual (
+ submitted_ind_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ loc_ind_id_upp varchar (64) NOT NULL ,
+ ind_id int NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ last_updated_time TIMESTAMP NULL ,
+ tax_id int NOT NULL ,
+ loc_ind_alias varchar (64) NULL ,
+ loc_ind_id varchar (64) NULL ,
+ loc_ind_grp varchar (64) NULL ,
+ ploidy smallint DEFAULT 2 NULL
+)
+;
+
+CREATE TABLE Synonym (
+ subsnp_id int NOT NULL ,
+ type varchar (64) NOT NULL ,
+ name varchar (64) NULL
+)
+;
+
+CREATE TABLE b132_ContigInfo_37_1 (
+ ctg_id int NOT NULL ,
+ tax_id int NOT NULL ,
+ contig_acc varchar (32) NOT NULL ,
+ contig_ver smallint NULL ,
+ contig_name varchar (32) NOT NULL ,
+ contig_chr varchar (32) NULL ,
+ contig_start int NULL ,
+ contig_end int NULL ,
+ orient smallint NULL ,
+ contig_gi int NULL ,
+ group_term varchar (32) NULL ,
+ group_label varchar (32) NULL ,
+ contig_label varchar (32) NULL ,
+ build_id int NULL ,
+ build_ver int NULL ,
+ last_updated_time TIMESTAMP NOT NULL ,
+ placement_status smallint NOT NULL
+)
+;
+
+CREATE TABLE b132_GenomeAssemblyInfo_37_1 (
+ assembly varchar (32) NOT NULL ,
+ assembly_type varchar (8) NOT NULL ,
+ rep_order smallint NULL ,
+ comment varchar (255) NULL ,
+ upd_time TIMESTAMP NULL
+)
+;
+
+CREATE TABLE b132_MapLinkInfo_37_1 (
+ gi int NULL ,
+ accession varchar (127) NULL ,
+ accession_ver int NULL
+)
+;
+
+CREATE TABLE b132_MapLink_37_1 (
+ snp_type char (2) NOT NULL ,
+ snp_id int NULL ,
+ gi int NOT NULL ,
+ accession_how_cd int NULL ,
+ "offset" int NULL ,
+ asn_to int NULL ,
+ lf_ngbr int NULL ,
+ rf_ngbr int NULL ,
+ lc_ngbr int NULL ,
+ rc_ngbr int NULL ,
+ loc_type smallint NULL ,
+ build_id int NULL ,
+ process_time TIMESTAMP NULL ,
+ process_status int NULL ,
+ orientation int NULL ,
+ allele varchar (1024) NULL ,
+ aln_quality float NULL ,
+ num_mism int NULL ,
+ num_ins int NULL ,
+ num_del int NULL ,
+ tier int NULL ,
+ ctg_gi int NULL ,
+ ctg_from int NULL ,
+ ctg_to int NULL ,
+ ctg_orient smallint NULL ,
+ source varchar (5) NOT NULL
+)
+;
+
+CREATE TABLE b132_ProteinInfo_37_1 (
+ prot_gi int NULL ,
+ prot_acc varchar (128) NULL ,
+ prot_ver int NULL
+)
+;
+
+CREATE TABLE b132_SNPChrPosOnRef_37_1 (
+ snp_id int NULL ,
+ chr varchar (32) NULL ,
+ pos int NULL ,
+ orien int NULL ,
+ neighbor_snp_list int NULL ,
+ isPAR varchar (1) NOT NULL
+)
+;
+
+CREATE TABLE b132_SNPContigLoc_37_1 (
+ snp_type char (2) NOT NULL ,
+ snp_id int NOT NULL ,
+ ctg_id int NOT NULL ,
+ asn_from int NOT NULL ,
+ asn_to int NOT NULL ,
+ lf_ngbr int NULL ,
+ rf_ngbr int NULL ,
+ lc_ngbr int NOT NULL ,
+ rc_ngbr int NOT NULL ,
+ loc_type smallint NOT NULL ,
+ phys_pos_from int NULL ,
+ snp_bld_id int NOT NULL ,
+ last_updated_time TIMESTAMP NOT NULL ,
+ process_status int NOT NULL ,
+ orientation smallint NULL ,
+ allele varchar (1024) NULL ,
+ loc_sts_uid int NULL ,
+ aln_quality float NULL ,
+ num_mism int NULL ,
+ num_del int NULL ,
+ num_ins int NULL ,
+ tier smallint NULL
+)
+;
+
+CREATE TABLE b132_SNPContigLocusId_37_1 (
+ snp_id int NULL ,
+ contig_acc varchar (32) NULL ,
+ contig_ver smallint NULL ,
+ asn_from int NULL ,
+ asn_to int NULL ,
+ locus_id int NULL ,
+ locus_symbol varchar (128) NULL ,
+ mrna_acc varchar (128) NULL ,
+ mrna_ver int NULL ,
+ protein_acc varchar (128) NULL ,
+ protein_ver int NULL ,
+ fxn_class int NULL ,
+ reading_frame int NULL ,
+ allele varchar (256) NULL ,
+ residue varchar (1024) NULL ,
+ aa_position int NULL ,
+ build_id varchar (4) NOT NULL ,
+ ctg_id int NULL ,
+ mrna_start int NULL ,
+ mrna_stop int NULL ,
+ codon varchar (1024) NULL ,
+ protRes char (3) NULL ,
+ contig_gi int NULL ,
+ mrna_gi int NULL ,
+ mrna_orien smallint NULL ,
+ cp_mrna_ver int NULL ,
+ cp_mrna_gi int NULL ,
+ verComp varchar (7) NOT NULL
+)
+;
+
+CREATE TABLE b132_SNPMapInfo_37_1 (
+ snp_type char (2) NOT NULL ,
+ snp_id int NOT NULL ,
+ chr_cnt int NOT NULL ,
+ contig_cnt int NOT NULL ,
+ loc_cnt int NOT NULL ,
+ weight int NOT NULL ,
+ hap_cnt int NOT NULL ,
+ placed_cnt int NOT NULL ,
+ grouped_cnt int NOT NULL ,
+ unplaced_cnt int NOT NULL ,
+ md5 char (32) NULL ,
+ assembly varchar (32) NULL
+)
+;
+
+CREATE TABLE dn_IND_batchCount (
+ batch_id int NOT NULL ,
+ pop_id int NOT NULL ,
+ ss_cnt int NOT NULL ,
+ rs_cnt int NOT NULL ,
+ ind_cnt int NOT NULL ,
+ create_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE dn_IND_batch_pop (
+ batch_id smallint NOT NULL ,
+ pop_id int NOT NULL ,
+ update_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE dn_PopulationIndGrp (
+ pop_id int NOT NULL ,
+ ind_grp_name varchar (32) NOT NULL ,
+ ind_grp_code smallint NOT NULL
+)
+;
+
+CREATE TABLE dn_batchCount (
+ batch_id int NOT NULL ,
+ ss_cnt int NOT NULL ,
+ rs_cnt int NOT NULL ,
+ rs_validated_cnt int NOT NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ pop_cnt int NULL ,
+ ind_cnt int NULL
+)
+;
+
+CREATE TABLE dn_handleCount (
+ handle varchar (20) NOT NULL ,
+ batch_type char (3) NOT NULL ,
+ ss_cnt int NOT NULL ,
+ rs_cnt int NULL ,
+ rs_validated_cnt int NULL ,
+ create_time TIMESTAMP NOT NULL
+)
+;
+
+CREATE TABLE dn_snpFxnCnt (
+ build_id int NOT NULL ,
+ fxn_class smallint NULL ,
+ snp_cnt int NOT NULL ,
+ gene_cnt int NOT NULL ,
+ create_time TIMESTAMP NOT NULL ,
+ last_updated_time TIMESTAMP NOT NULL ,
+ tax_id int NOT NULL
+)
+;
+
+CREATE TABLE dn_table_rowcount (
+ tabname varchar (64) NOT NULL ,
+ row_cnt int NOT NULL ,
+ build_id int NOT NULL ,
+ update_time TIMESTAMP NOT NULL ,
+ rows_in_spaceused int NULL ,
+ reserved_KB_spaceused int NULL ,
+ data_KB_spaceused int NULL ,
+ index_size_KB_spaceused int NULL ,
+ unused_KB_spaceused int NULL
+)
+;
+
--- /dev/null
+ALTER TABLE [SubInd_ch1] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch1] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch2] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch2] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch3] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch3] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch4] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch4] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch5] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch5] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch6] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch6] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch7] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch7] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+
--- /dev/null
+ALTER TABLE SubInd_ch1 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch1 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch2 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch2 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch3 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch3 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch4 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch4 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch5 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch5 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch6 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch6 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch7 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch7 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+
--- /dev/null
+ CREATE INDEX [i_bs] ON [SubInd_ch1]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch1]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch2]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch2]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch3]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch3]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch4]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch4]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch5]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch5]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch6]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch6]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch7]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch7]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE CLUSTERED INDEX [i_b_size] ON [dn_table_rowcount]([build_id] DESC , [reserved_KB_spaceused] DESC )
+GO
+
+
--- /dev/null
+ CREATE INDEX ON SubInd_ch1(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch1(submitted_ind_id, subsnp_id, gty_id)
+;
+CREATE INDEX ON SubInd_ch1(subsnp_id);
+CREATE INDEX ON SubInd_ch2(subsnp_id);
+CREATE INDEX ON SubInd_ch3(subsnp_id);
+CREATE INDEX ON SubInd_ch4(subsnp_id);
+CREATE INDEX ON SubInd_ch5(subsnp_id);
+CREATE INDEX ON SubInd_ch6(subsnp_id);
+CREATE INDEX ON SubInd_ch7(subsnp_id);
+CREATE INDEX ON SubInd_ch8(subsnp_id);
+CREATE INDEX ON SubInd_ch9(subsnp_id);
+
+
+ CREATE INDEX ON SubInd_ch2(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch2(submitted_ind_id, subsnp_id, gty_id)
+;
+
+
+ CREATE INDEX ON SubInd_ch3(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch3(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch4(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch4(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch5(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch5(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch6(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch6(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch7(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch7(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON dn_table_rowcount(build_id DESC , reserved_KB_spaceused DESC )
+;
+
--- /dev/null
+#!/usr/bin/perl
+
+use warnings;
+use strict;
+my @chr = (1..22,
+ qw(AltOnly MT NewSs NotOn PAR Un X Y)
+ );
+my %chr;
+@chr{@chr} = @chr;
+$chr{NewSs} = 'ss';
+
+my %args;
+@args{map {my $a = $_; lc($a)} @ARGV} = 1;
+
+if ($args{drop}) {
+ for my $chr (@chr) {
+ print "DROP TABLE SubInd_ch${chr};\n";
+ }
+ print "DROP TABLE SubInd;\n";
+}
+if ($args{create}) {
+ print <<END;
+CREATE TABLE SubInd (
+ chr VARCHAR NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+);
+END
+ for my $chr (@chr) {
+ print "CREATE TABLE SubInd_ch${chr} (CHECK (chr = '$chr{${chr}}')) INHERITS (SubInd);\n";
+ }
+}
+if ($args{trigger}) {
+ print <<EOF;
+CREATE OR REPLACE FUNCTION subind_insert_trigger()
+RETURNS TRIGGER AS \$\$
+BEGIN
+EOF
+ for my $chr (@chr) {
+ print <<EOF;
+IF (NEW.chr = '${chr}') THEN
+ INSERT INTO SubInd_ch${chr} VALUES (NEW.*);
+EOF
+ print "ELS";
+ }
+ print <<EOF;
+E
+RAISE EXCEPTION 'chr out of range!';
+END IF;
+RETURN NULL;
+END;
+\$\$
+LANGUAGE plpgsql;
+EOF
+}
+if ($args{index}) {
+ for my $chr (@chr) {
+ print "CREATE INDEX ON SubInd_ch${chr}(subsnp_id);\n";
+ print "CREATE INDEX ON SubInd_ch${chr}(submitted_ind_id,subsnp_id,gty_id);\n";
+ }
+}
+
--- /dev/null
+CREATE TABLE [SubInd_ch1] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch2] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch3] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch4] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch5] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch6] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch7] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [dn_table_rowcount] (
+ [tabname] [varchar] (64) NOT NULL ,
+ [row_cnt] [int] NOT NULL ,
+ [build_id] [int] NOT NULL ,
+ [update_time] [datetime] NOT NULL ,
+ [rows_in_spaceused] [int] NULL ,
+ [reserved_KB_spaceused] [int] NULL ,
+ [data_KB_spaceused] [int] NULL ,
+ [index_size_KB_spaceused] [int] NULL ,
+ [unused_KB_spaceused] [int] NULL
+)
+GO
+
+
--- /dev/null
+CREATE TABLE SubInd (
+ chr CHAR NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+);
+
+CREATE TABLE SubInd_ch1 CHECK (chr = '1') INHERITS SubInd;
+CREATE TABLE SubInd_ch2 CHECK (chr = '2') INHERITS SubInd;
+CREATE TABLE SubInd_ch3 CHECK (chr = '3') INHERITS SubInd;
+CREATE TABLE SubInd_ch4 CHECK (chr = '4') INHERITS SubInd;
+CREATE TABLE SubInd_ch5 CHECK (chr = '5') INHERITS SubInd;
+CREATE TABLE SubInd_ch6 CHECK (chr = '6') INHERITS SubInd;
+CREATE TABLE SubInd_ch7 CHECK (chr = '7') INHERITS SubInd;
+CREATE TABLE SubInd_ch8 CHECK (chr = '8') INHERITS SubInd;
+CREATE TABLE SubInd_ch9 CHECK (chr = '9') INHERITS SubInd;
+CREATE TABLE SubInd_ch10 CHECK (chr = '10') INHERITS SubInd;
+CREATE TABLE SubInd_ch11 CHECK (chr = '11') INHERITS SubInd;
+CREATE TABLE SubInd_ch12 CHECK (chr = '12') INHERITS SubInd;
+CREATE TABLE SubInd_ch13 CHECK (chr = '13') INHERITS SubInd;
+CREATE TABLE SubInd_ch14 CHECK (chr = '14') INHERITS SubInd;
+CREATE TABLE SubInd_ch15 CHECK (chr = '15') INHERITS SubInd;
+CREATE TABLE SubInd_ch16 CHECK (chr = '16') INHERITS SubInd;
+CREATE TABLE SubInd_ch17 CHECK (chr = '17') INHERITS SubInd;
+CREATE TABLE SubInd_ch18 CHECK (chr = '18') INHERITS SubInd;
+CREATE TABLE SubInd_ch19 CHECK (chr = '19') INHERITS SubInd;
+CREATE TABLE SubInd_ch20 CHECK (chr = '20') INHERITS SubInd;
+CREATE TABLE SubInd_ch21 CHECK (chr = '21') INHERITS SubInd;
+CREATE TABLE SubInd_ch22 CHECK (chr = '22') INHERITS SubInd;
+CREATE TABLE SubInd_chAltOnly CHECK (chr = 'AltOnly') INHERITS SubInd;
+CREATE TABLE SubInd_chMT CHECK (chr = 'MT') INHERITS SubInd;
+CREATE TABLE SubInd_chMulti CHECK (chr = 'Multi') INHERITS SubInd;
+CREATE TABLE SubInd_chNewSs CHECK (chr = 'NewSs') INHERITS SubInd;
+CREATE TABLE SubInd_chNotOn CHECK (chr = 'NotOn') INHERITS SubInd;
+CREATE TABLE SubInd_chPAR CHECK (chr = 'PAR') INHERITS SubInd;
+CREATE TABLE SubInd_chUn CHECK (chr = 'Un') INHERITS SubInd;
+CREATE TABLE SubInd_chX CHECK (chr = 'X') INHERITS SubInd;
+CREATE TABLE SubInd_chY CHECK (chr = 'Y') INHERITS SubInd;
+
+
+CREATE TABLE dn_table_rowcount (
+ tabname varchar (64) NOT NULL ,
+ row_cnt int NOT NULL ,
+ build_id int NOT NULL ,
+ update_time TIMESTAMP NOT NULL ,
+ rows_in_spaceused int NULL ,
+ reserved_KB_spaceused int NULL ,
+ data_KB_spaceused int NULL ,
+ index_size_KB_spaceused int NULL ,
+ unused_KB_spaceused int NULL
+)
+;
+
--- /dev/null
+ALTER TABLE [SubInd_ch10] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch10] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch11] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch11] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch12] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch12] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch13] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch13] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch14] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch14] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch15] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch15] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch16] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch16] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch17] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch17] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch18] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch18] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch19] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch19] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch20] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch20] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch21] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch21] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch22] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch22] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch8] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch8] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_ch9] ADD
+ CONSTRAINT [pk_ch_t_SubInd_ch9] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chAltOnly] ADD
+ CONSTRAINT [pk_SubInd_chAltOnly] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chMT] ADD
+ CONSTRAINT [pk_ch_t_SubInd_chMT] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chMulti] ADD
+ CONSTRAINT [pk_SubInd_chMulti] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chNewSs] ADD
+ CONSTRAINT [pk_SubInd_chNewSs] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chNotOn] ADD
+ CONSTRAINT [pk_SubInd_chNotOn] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chPAR] ADD
+ CONSTRAINT [pk_SubInd_chPAR] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chUn] ADD
+ CONSTRAINT [pk_SubInd_chUn] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chX] ADD
+ CONSTRAINT [pk_ch_t_SubInd_chX] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+ALTER TABLE [SubInd_chY] ADD
+ CONSTRAINT [pk_ch_t_SubInd_chY] PRIMARY KEY CLUSTERED
+ (
+ [subsnp_id],
+ [submitted_ind_id],
+ [batch_id],
+ [chr]
+ )
+GO
+
+
+
--- /dev/null
+ALTER TABLE SubInd_ch10 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch10 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch11 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch11 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch12 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch12 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch13 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch13 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch14 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch14 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch15 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch15 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch16 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch16 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch17 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch17 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch18 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch18 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch19 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch19 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch20 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch20 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch21 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch21 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch22 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch22 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch8 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch8 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_ch9 ADD
+ CONSTRAINT pk_ch_t_SubInd_ch9 PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chAltOnly ADD
+ CONSTRAINT pk_SubInd_chAltOnly PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chMT ADD
+ CONSTRAINT pk_ch_t_SubInd_chMT PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chMulti ADD
+ CONSTRAINT pk_SubInd_chMulti PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chNewSs ADD
+ CONSTRAINT pk_SubInd_chNewSs PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chNotOn ADD
+ CONSTRAINT pk_SubInd_chNotOn PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chPAR ADD
+ CONSTRAINT pk_SubInd_chPAR PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chUn ADD
+ CONSTRAINT pk_SubInd_chUn PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chX ADD
+ CONSTRAINT pk_ch_t_SubInd_chX PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+ALTER TABLE SubInd_chY ADD
+ CONSTRAINT pk_ch_t_SubInd_chY PRIMARY KEY
+ (
+ subsnp_id,
+ submitted_ind_id,
+ batch_id,
+ chr
+ )
+;
+
+
--- /dev/null
+ CREATE INDEX [i_bs] ON [SubInd_ch10]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch10]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch11]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch11]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch12]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch12]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch13]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch13]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch14]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch14]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch15]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch15]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch16]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch16]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch17]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch17]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch18]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch18]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch19]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch19]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch20]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch20]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch21]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch21]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch22]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch22]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch8]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch8]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_ch9]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_ch9]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chAltOnly]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chAltOnly]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chMT]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chMT]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chMulti]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chMulti]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_batch_ss] ON [SubInd_chNewSs]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chNewSs]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chNotOn]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chNotOn]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chPAR]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chPAR]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chUn]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chUn]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chX]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chX]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE INDEX [i_bs] ON [SubInd_chY]([batch_id], [subsnp_id])
+GO
+
+ CREATE INDEX [i_ind_ss] ON [SubInd_chY]([submitted_ind_id], [subsnp_id], [gty_id])
+GO
+
+
+ CREATE CLUSTERED INDEX [i_b_size] ON [dn_table_rowcount]([build_id] DESC , [reserved_KB_spaceused] DESC )
+GO
+
+
--- /dev/null
+ CREATE INDEX ON SubInd_ch10(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch10(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch11(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch11(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch12(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch12(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch13(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch13(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch14(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch14(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch15(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch15(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch16(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch16(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch17(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch17(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch18(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch18(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch19(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch19(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch20(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch20(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch21(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch21(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch22(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch22(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch8(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch8(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_ch9(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_ch9(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chAltOnly(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chAltOnly(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chMT(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chMT(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chMulti(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chMulti(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chNewSs(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chNewSs(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chNotOn(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chNotOn(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chPAR(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chPAR(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chUn(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chUn(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chX(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chX(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON SubInd_chY(batch_id, subsnp_id)
+;
+ CREATE INDEX ON SubInd_chY(submitted_ind_id, subsnp_id, gty_id)
+;
+
+ CREATE INDEX ON dn_table_rowcount(build_id DESC , reserved_KB_spaceused DESC )
+;
+
--- /dev/null
+CREATE TABLE [SubInd_ch10] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch11] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch12] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch13] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch14] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch15] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch16] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch17] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch18] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch19] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch20] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch21] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch22] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch8] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_ch9] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chAltOnly] (
+ [chr] [varchar] (8) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chMT] (
+ [chr] [varchar] (8) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chMulti] (
+ [chr] [varchar] (8) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chNewSs] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [tinyint] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chNotOn] (
+ [chr] [varchar] (8) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chPAR] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chUn] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chX] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [SubInd_chY] (
+ [chr] [varchar] (3) NOT NULL ,
+ [batch_id] [int] NOT NULL ,
+ [subsnp_id] [int] NOT NULL ,
+ [submitted_ind_id] [int] NOT NULL ,
+ [submitted_strand_code] [int] NULL ,
+ [allele_flag] [int] NULL ,
+ [gty_id] [int] NULL ,
+ [submitted_rs] [int] NULL
+)
+GO
+
+
+CREATE TABLE [dn_table_rowcount] (
+ [tabname] [varchar] (64) NOT NULL ,
+ [row_cnt] [int] NOT NULL ,
+ [build_id] [int] NOT NULL ,
+ [update_time] [datetime] NOT NULL ,
+ [rows_in_spaceused] [int] NULL ,
+ [reserved_KB_spaceused] [int] NULL ,
+ [data_KB_spaceused] [int] NULL ,
+ [index_size_KB_spaceused] [int] NULL ,
+ [unused_KB_spaceused] [int] NULL
+)
+GO
+
+
--- /dev/null
+CREATE TABLE SubInd_ch10 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch11 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch12 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch13 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch14 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch15 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch16 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch17 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch18 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch19 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch20 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch21 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch22 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch8 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_ch9 (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chAltOnly (
+ chr varchar (8) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chMT (
+ chr varchar (8) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chMulti (
+ chr varchar (8) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chNewSs (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag smallint NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chNotOn (
+ chr varchar (8) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chPAR (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chUn (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chX (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE SubInd_chY (
+ chr varchar (3) NOT NULL ,
+ batch_id int NOT NULL ,
+ subsnp_id int NOT NULL ,
+ submitted_ind_id int NOT NULL ,
+ submitted_strand_code int NULL ,
+ allele_flag int NULL ,
+ gty_id int NULL ,
+ submitted_rs int NULL
+)
+;
+
+CREATE TABLE dn_table_rowcount (
+ tabname varchar (64) NOT NULL ,
+ row_cnt int NOT NULL ,
+ build_id int NOT NULL ,
+ update_time TIMESTAMP NOT NULL ,
+ rows_in_spaceused int NULL ,
+ reserved_KB_spaceused int NULL ,
+ data_KB_spaceused int NULL ,
+ index_size_KB_spaceused int NULL ,
+ unused_KB_spaceused int NULL
+)
+;
+
projects / dbsnp.git / commitdiff