3 Package Needs License Other
4 =================================================================================
7 ---------------------------------------------------------------------------------
11 rtiff tiff + gpl added
14 DierckxSpline new version builds
16 StatFingerprints tcltk2 now builds
17 WriteXLS (many) sysreq ignore added
21 gwidgetsWWW Rpad, rebuilt
22 rgrs xclip added alias_run,sysreq
23 scagnostics scagnostics license -- added
24 seewave flac added alias_run,sysreq
25 snpXpert tcltk2 now builds
26 tlnise tlnise license added
27 toosm tlnise now builds
28 SuppDists build bombs, DESCRIPTION needs space, patch added
33 ---------------------------------------------------------------------------------
34 ADaCGH tilingArray (BioC)
36 DAAGbio limma (BioC ?)
41 HAPim odd build failure
42 MatchIt need small patch
43 Metabonomic PROcess (BioC ?)
45 RJaCGH contains zlib, may need patch
46 RLadyBug needs small patch
47 Rsymphony build bombs, patch ?, Debian build
48 SNPMaP affxparser, SNPMaP.cdm (BioC)
49 SubpathwayMiner KEGG.db (BioC)
50 gene2pathway KEGG.db (BioC)
51 TSpaid build bombs, wild linking ?
54 bayesCGH snapCGH (BioC ?)
55 classGraoh Rgraphviz (BioC ?)
56 gcExplorer Rgraphviz (BioC ?)
57 logilasso Rgraphviz (BioC ?)
58 pcalg Rgraphviz (BioC ?)
59 qdg pcalg -> Rgraphviz
60 celsius BioBase (BioC ?)
61 multtest BioBase (BioC ?)
62 hopach BioBase (BioC ?)
63 multtest BioBase (BioC ?)
64 GExMap multtest (BioC)
65 LMGene multtest (BioC)
66 crosshybDetector marray (disappread ?)
67 dlmap empty DESCRIPTION ?
68 fPortfolio RSymphony (which will be in Debian)
70 mpm geneplotter (BioC ?)
73 race remove debian/ from source tarball ?
74 sabreR contains binary, lintian override ?
76 sgeostat license ? package gone ?
77 sisus annotate, Biobase (BioC ?)
78 svSocket small patch re tcl path
81 ---------------------------------------------------------------------------------------------
83 AIGIS gpclib non-commercial
84 RSurvey gpclib non-commercial
88 DSpat spatstat -> gpclib non-commercial
89 SGCS spatstat -> gpclib
90 arrayMissPattern spatstat -> gpclib
91 ecespa spatstat -> gpclib
92 spatclus spatstat -> gpclib
94 gmvalid CoCo not-for-profit
95 ConCalendar non-commercial
107 mapproj non-commercial
108 Geneland mapproj non-commercial
110 SDDA non-commercial CSIRO license
111 optmatch non-commercial
112 SpectralGEM optmatch non-commercial
113 realized non-commercial
114 asypow acm non-commercial
115 caMassClass non-commercial
116 mapproj non-commercial
118 rngwell19937 non-commercial
119 spatialkernel gpc library in non-commercial
122 ----------------------------------------------------------------------------------------------
123 CarbonEL Mac OS X only
124 ROracle requires Oracle libs
125 RScaLAPAPCK licese is free MPI, Blacs, ScaLAPACK, ...
129 VhayuR Vhauy required
130 gputools nvcc (>= 2.1)
131 klar svmlight (non-commercial)
133 rimage C++ needs g++ 4.* update