git.donarmstrong.com Git - biopieces.git/commit

]> git.donarmstrong.com Git - biopieces.git/commit

author	martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
	Tue, 12 May 2009 20:37:35 +0000 (20:37 +0000)
committer	martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
	Tue, 12 May 2009 20:37:35 +0000 (20:37 +0000)
commit	c32b13419ca8e524a5c98869048d0be670ee76d0
tree	f9ac289afe41c766c07f959c2bce402b098e8938	tree \| snapshot
parent	0068808ecc7d9e3fb215ae272ab396266c13438a	commit \| diff

split Biopieces.pm into BioRun.pm and Biopieces.pm

git-svn-id: http://biopieces.googlecode.com/svn/trunk@370 74ccb610-7750-0410-82ae-013aeee3265d

100 files changed:

bp_bin/add_ident		diff \| blob \| history
bp_bin/align_seq		diff \| blob \| history
bp_bin/analyze_bed		diff \| blob \| history
bp_bin/analyze_seq		diff \| blob \| history
bp_bin/analyze_tags		diff \| blob \| history
bp_bin/analyze_vals		diff \| blob \| history
bp_bin/assemble_tag_contigs		diff \| blob \| history
bp_bin/blast_seq		diff \| blob \| history
bp_bin/blat_seq		diff \| blob \| history
bp_bin/calc_bit_scores		diff \| blob \| history
bp_bin/calc_fixedstep		diff \| blob \| history
bp_bin/complement_seq		diff \| blob \| history
bp_bin/complexity_seq		diff \| blob \| history
bp_bin/compute		diff \| blob \| history
bp_bin/count_records		diff \| blob \| history
bp_bin/count_vals		diff \| blob \| history
bp_bin/create_blast_db		diff \| blob \| history
bp_bin/create_vmatch_index		diff \| blob \| history
bp_bin/create_weight_matrix		diff \| blob \| history
bp_bin/extract_seq		diff \| blob \| history
bp_bin/flip_tab		diff \| blob \| history
bp_bin/fold_seq		diff \| blob \| history
bp_bin/format_genome		diff \| blob \| history
bp_bin/get_genome_align		diff \| blob \| history
bp_bin/get_genome_phastcons		diff \| blob \| history
bp_bin/get_genome_seq		diff \| blob \| history
bp_bin/grab		diff \| blob \| history
bp_bin/head_records		diff \| blob \| history
bp_bin/invert_align		diff \| blob \| history
bp_bin/length_seq		diff \| blob \| history
bp_bin/length_vals		diff \| blob \| history
bp_bin/list_biopieces		diff \| blob \| history
bp_bin/list_genomes		diff \| blob \| history
bp_bin/match_seq		diff \| blob \| history
bp_bin/max_vals		diff \| blob \| history
bp_bin/mean_vals		diff \| blob \| history
bp_bin/median_vals		diff \| blob \| history
bp_bin/merge_records		diff \| blob \| history
bp_bin/merge_vals		diff \| blob \| history
bp_bin/min_vals		diff \| blob \| history
bp_bin/oligo_freq		diff \| blob \| history
bp_bin/patscan_seq		diff \| blob \| history
bp_bin/plot_chrdist		diff \| blob \| history
bp_bin/plot_histogram		diff \| blob \| history
bp_bin/plot_karyogram		diff \| blob \| history
bp_bin/plot_lendist		diff \| blob \| history
bp_bin/plot_matches		diff \| blob \| history
bp_bin/plot_phastcons_profiles		diff \| blob \| history
bp_bin/plot_seqlogo		diff \| blob \| history
bp_bin/print_usage		diff \| blob \| history
bp_bin/random_records		diff \| blob \| history
bp_bin/read_2bit		diff \| blob \| history
bp_bin/read_bed		diff \| blob \| history
bp_bin/read_blast_tab		diff \| blob \| history
bp_bin/read_embl		diff \| blob \| history
bp_bin/read_fasta		diff \| blob \| history
bp_bin/read_fixedstep		diff \| blob \| history
bp_bin/read_gff		diff \| blob \| history
bp_bin/read_mysql		diff \| blob \| history
bp_bin/read_phastcons		diff \| blob \| history
bp_bin/read_psl		diff \| blob \| history
bp_bin/read_soft		diff \| blob \| history
bp_bin/read_solexa		diff \| blob \| history
bp_bin/read_solid		diff \| blob \| history
bp_bin/read_stockholm		diff \| blob \| history
bp_bin/read_tab		diff \| blob \| history
bp_bin/read_ucsc_config		diff \| blob \| history
bp_bin/remove_adaptor		diff \| blob \| history
bp_bin/remove_indels		diff \| blob \| history
bp_bin/remove_keys		diff \| blob \| history
bp_bin/remove_mysql_tables		diff \| blob \| history
bp_bin/remove_ucsc_tracks		diff \| blob \| history
bp_bin/rename_keys		diff \| blob \| history
bp_bin/reverse_seq		diff \| blob \| history
bp_bin/shuffle_seq		diff \| blob \| history
bp_bin/soap_seq		diff \| blob \| history
bp_bin/sort_records		diff \| blob \| history
bp_bin/split_bed		diff \| blob \| history
bp_bin/split_seq		diff \| blob \| history
bp_bin/sum_vals		diff \| blob \| history
bp_bin/tile_seq		diff \| blob \| history
bp_bin/translate_seq		diff \| blob \| history
bp_bin/transliterate_seq		diff \| blob \| history
bp_bin/transliterate_vals		diff \| blob \| history
bp_bin/uniq_vals		diff \| blob \| history
bp_bin/upload_to_ucsc		diff \| blob \| history
bp_bin/uppercase_seq		diff \| blob \| history
bp_bin/vmatch_seq		diff \| blob \| history
bp_bin/write_2bit		diff \| blob \| history
bp_bin/write_align		diff \| blob \| history
bp_bin/write_bed		diff \| blob \| history
bp_bin/write_blast		diff \| blob \| history
bp_bin/write_fasta		diff \| blob \| history
bp_bin/write_fixedstep		diff \| blob \| history
bp_bin/write_psl		diff \| blob \| history
bp_bin/write_solid		diff \| blob \| history
bp_bin/write_tab		diff \| blob \| history
bp_bin/write_ucsc_config		diff \| blob \| history
code_perl/Maasha/BioRun.pm	[new file with mode: 0644]	blob
code_perl/Maasha/Biopieces.pm		diff \| blob \| history

Mirror (and my branches) of biopieces http://www.biopieces.org/

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