]> git.donarmstrong.com Git - biopieces.git/commit
git-svn-id: http://biopieces.googlecode.com/svn/trunk@375 74ccb610-7750-0410-82ae...
authormartinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Wed, 13 May 2009 15:20:09 +0000 (15:20 +0000)
committermartinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Wed, 13 May 2009 15:20:09 +0000 (15:20 +0000)
commitb817a3ff6e6cadd0598baec0772050e167e9b29d
treeda30053ea7a7f546adf9d48c4bdaa3cc12580bc4
parent2938df3fd8348aef2ce10ad8e846331d53d8d348
git-svn-id: http://biopieces.googlecode.com/svn/trunk@375 74ccb610-7750-0410-82ae-013aeee3265d
99 files changed:
bp_bin/00README [deleted file]
bp_bin/add_ident [deleted symlink]
bp_bin/align_seq [deleted symlink]
bp_bin/analyze_bed [deleted symlink]
bp_bin/analyze_seq [deleted symlink]
bp_bin/analyze_tags [deleted symlink]
bp_bin/analyze_vals [deleted symlink]
bp_bin/assemble_tag_contigs [deleted symlink]
bp_bin/blast_seq [deleted symlink]
bp_bin/blat_seq [deleted symlink]
bp_bin/calc_bit_scores [deleted symlink]
bp_bin/calc_fixedstep [deleted symlink]
bp_bin/complement_seq [deleted symlink]
bp_bin/complexity_seq [deleted symlink]
bp_bin/compute [deleted symlink]
bp_bin/count_records [deleted symlink]
bp_bin/count_vals [deleted symlink]
bp_bin/create_blast_db [deleted symlink]
bp_bin/create_vmatch_index [deleted symlink]
bp_bin/create_weight_matrix [deleted symlink]
bp_bin/extract_seq [deleted symlink]
bp_bin/flip_tab [deleted symlink]
bp_bin/fold_seq [deleted symlink]
bp_bin/format_genome [deleted symlink]
bp_bin/get_genome_align [deleted symlink]
bp_bin/get_genome_phastcons [deleted symlink]
bp_bin/get_genome_seq [deleted symlink]
bp_bin/grab [deleted symlink]
bp_bin/head_records [deleted symlink]
bp_bin/invert_align [deleted symlink]
bp_bin/length_seq [deleted symlink]
bp_bin/length_vals [deleted symlink]
bp_bin/list_biopieces [deleted symlink]
bp_bin/list_genomes [deleted symlink]
bp_bin/lowercase_seq [deleted symlink]
bp_bin/match_seq [deleted symlink]
bp_bin/max_vals [deleted symlink]
bp_bin/mean_vals [deleted symlink]
bp_bin/median_vals [deleted symlink]
bp_bin/merge_vals [deleted symlink]
bp_bin/min_vals [deleted symlink]
bp_bin/oligo_freq [deleted symlink]
bp_bin/patscan_seq [deleted symlink]
bp_bin/plot_chrdist [deleted symlink]
bp_bin/plot_histogram [deleted symlink]
bp_bin/plot_karyogram [deleted symlink]
bp_bin/plot_lendist [deleted symlink]
bp_bin/plot_matches [deleted symlink]
bp_bin/plot_phastcons_profiles [deleted symlink]
bp_bin/plot_seqlogo [deleted symlink]
bp_bin/print_usage [deleted symlink]
bp_bin/random_records [deleted symlink]
bp_bin/read_2bit [deleted symlink]
bp_bin/read_bed [deleted symlink]
bp_bin/read_blast_tab [deleted symlink]
bp_bin/read_embl [deleted symlink]
bp_bin/read_fasta [deleted symlink]
bp_bin/read_fixedstep [deleted symlink]
bp_bin/read_gff [deleted symlink]
bp_bin/read_mysql [deleted symlink]
bp_bin/read_phastcons [deleted symlink]
bp_bin/read_psl [deleted symlink]
bp_bin/read_soft [deleted symlink]
bp_bin/read_solexa [deleted symlink]
bp_bin/read_solid [deleted symlink]
bp_bin/read_stockholm [deleted symlink]
bp_bin/read_tab [deleted symlink]
bp_bin/read_ucsc_config [deleted symlink]
bp_bin/remove_adaptor [deleted symlink]
bp_bin/remove_indels [deleted symlink]
bp_bin/remove_keys [deleted symlink]
bp_bin/remove_mysql_tables [deleted symlink]
bp_bin/remove_ucsc_tracks [deleted symlink]
bp_bin/rename_keys [deleted symlink]
bp_bin/reverse_seq [deleted symlink]
bp_bin/shuffle_seq [deleted symlink]
bp_bin/soap_seq [deleted symlink]
bp_bin/sort_records [deleted symlink]
bp_bin/split_bed [deleted symlink]
bp_bin/split_seq [deleted symlink]
bp_bin/sum_vals [deleted symlink]
bp_bin/tile_seq [deleted symlink]
bp_bin/translate_seq [deleted symlink]
bp_bin/transliterate_seq [deleted symlink]
bp_bin/transliterate_vals [deleted symlink]
bp_bin/uniq_vals [deleted symlink]
bp_bin/upload_to_ucsc [deleted symlink]
bp_bin/uppercase_seq [deleted symlink]
bp_bin/vmatch_seq [deleted symlink]
bp_bin/write_2bit [deleted symlink]
bp_bin/write_align [deleted symlink]
bp_bin/write_bed [deleted symlink]
bp_bin/write_blast [deleted symlink]
bp_bin/write_fasta [deleted symlink]
bp_bin/write_fixedstep [deleted symlink]
bp_bin/write_psl [deleted symlink]
bp_bin/write_solid [deleted symlink]
bp_bin/write_tab [deleted symlink]
bp_bin/write_ucsc_config [deleted symlink]