]> git.donarmstrong.com Git - biopieces.git/blob - bp_test/in/assemble_pairs.in
rewrite of FASTQ internals
[biopieces.git] / bp_test / in / assemble_pairs.in
1 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:14862:1868 1:N:0:14
2 SEQ: TGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGAAAAGTTAACGGTTAATAACCGTTAGCCTTGACGTTAACTTTAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTAGGCGGTTTATTCAGTCAGATGTG
3 SEQ_LEN: 249
4 SCORES: !??????BDDDDDDDDGGGGGGGHHIIIEHIHHFGGHFHHGHFHHDHEHEHHFAFFGFFHFHHFFHHHEFEEHHHHHHHHHHHHFFFHFHHHHHHHHHHHHGBDEGGGGGGGGGGGGGGGGEGEGGGGGCEGGGGECCECEEECGGG!ADGCGGGEGGEGGGGGEGCE8!2!DC!EEEGGC?!DGCCCEC:C?CCEGGGGCC)?EGEE:?C84.'80*:C8?C!??2CE22.48C:?*CC?:C*:?C?C
5 ---
6 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:14862:1868 2:N:0:14
7 SEQ: CCTGTTTGCTACCCACGCTTTCGTACCTCAGCGTCAGTATTGGTCCAGAAAGCTGCCTTCGCCATTGATGTTCCTTCTGATATCTACGCATTTCACCGCTACACCAGAAATTCCACTTTCCTCTACCATACTCTAGTTGACCAGTTTCAAATGCAGTTCCCAGGTTAAGCCCGGGGCTTTCACATCTGACTTAATAAACCGCCTACGCACGCTTTACGCCCAGTAATTC
8 SEQ_LEN: 229
9 SCORES: ?????BB!-!BDDDDDFEEFFFHFFHI;F;EGHHDHEF9?ECDC?FFFFFGGFGHIH?GFDEE!EHHFFCGFHHIIIIIHHHHIHDHFHHHHDDGGGHHHHHHHHHFFF@FFD!BFDFBFB?=DDE=DEDEEDBDEBECFEA=CBEAACFCA,,==CE==,,=)*1?A:::?8D8'4;AA::CACEEE?A?AACEEEEC*'48).0)'A;D?A))*108..?*1*1:::
10 ---
11 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:13906:2139 1:N:0:14
12 SEQ: TAGGGAATCTTGCACAATGGAGGAAACTCTGATGCAGCGATGCCGCGTGAGTGAAGAAGGCCTTTGGGTTGTAAAGCTCTTTCGTCGGGGAAGAAAATGACTGTACCCGAATAAGAAGGTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGACCTAGCGTAGTTCGGAATTACTGGGCTTAAAGAGTTCGTAGGTGGTTAAAAACGTTGGTGGTGAAATCCCAGAGCTTAACGCTGGAACTG
13 SEQ_LEN: 251
14 SCORES: !???9?BBBDBDDBDDFFFFFFHHHIFHFHHIHHFHHHHEDDEGHHHCEHE?EFHFGHFHFHIHIIIHCECEHHHIFHIIIHGHFHHHHHHEEFFFFFEEFFFEFFFEEEEEFFFFFFFCEFBEEDEFFFFFFEFEFFEEFFFFDDDDA?EEEFFEEEDECAEE?:ADAA!AEEFDA?CEEF:?CA8EEEEAEEE:AACEFFECEEEE?:?CA).0:AE88).0::CEEEEEC?A*:AA:*)..?!AEEF:
15 ---
16 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:13906:2139 2:N:0:14
17 SEQ: TCTTCGCTACCCATGCTTTCGTTCCTCAGCGTCAGTAATGATCCAGAAAGCTGCCTTCGCAATCGGTATTCTTTCTAATATCTACGAATTTCACCTCTACACTAGAAATTCTGCTTTCCTCTATCATACTCTAGCTAAAAAGTTTTGATGGCAGTTCCAGAGTTAAGCTCTGGGATTTCACCACCAACTTTTTTAACCACCTACGAACTCTTTAAGCCCAGTAATTCCGAACTACGCTAGGTCCCTT
18 SEQ_LEN: 247
19 SCORES: !??BB?DDABDBDDFFFFFFHFHIHFHHIIHEHEHF?E?0CDFGFFHHIHFFFHHHGD@E@EDBFH!5EGHHHIIIGGCGHHHFHIHHAFBCGGGGHHFFFHFFFHFHFF?DDBDFH.?FFFFFBFFFEDEEEFEFF=BDEEEECCEEA=AB=?CEC=AC,!5=BE:CE*?*?E?*?:*:*1:8?A?AEEFEE!E:*1:8AEEE?)?8?:?:CEAEAAE*81?*?CEE:8??**1)5.).8A*:A:?
20 ---
21 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:14865:2158 1:N:0:14
22 SEQ: TAGGGAATCTTGCACAATGGAGGAAACTCTGATGCAGCGATGCCGCGTGAGTGAAGAAGGCCTTTGGGTTGTAAAGCTCTTTCGTCGGGGAAGAAAATGACTGTACCCGAATAAGAAGGTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGACCTAGCGTAGTTCGGAATTACTGGGCTTAAAGAGTTCGTAGGTGGTTAAAAAAGTTGGTGGTGAAATCCCAGAGCTTAACTCTGGAACT
23 SEQ_LEN: 250
24 SCORES: ?????BBBBBDDBDDBFFFFFFECHFHFHFHGHHFGD?!CFHHHHHH!DEEFFFFDFFHF@FHHHIFHEEHHHIIHHHIHIHHHDEHHHHFEEFFF?FEEEEFEEFFEE:!CEEFEFFFBEEEEEDEFE::AE:?AECEFEF?A!;D88;CEEEEFEA;AECEEECE;0?!0:AADAAECEFFEEECEAACE:CA:*?C8?CE::CE8ACCA:4?:AC:8888):*:?EA*::8**1**11??:E?CA:?
25 ---
26 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:14865:2158 2:N:0:14
27 SEQ: CTTCGCTACCCATGCTTTCGTTCCTCAGTGTCAGTAATGATCCAGAAAGCTGCCTTCGCAATCGGTATTCTTTCTAATATCTACGAATTTCACCTCTACACTAGAAATTCTGCTTTCCTCTATCATACTCTAGCTAAAAAGTTTTGATGGCAGTTCCAGAGTTAAGCTCTGGGATTTCACCACCAACTTTTTTAACCACCTACGAACTCTTTAAGCCCAGTAATTCCGAACTACGCTAGGTCCCTTC
28 SEQ_LEN: 247
29 SCORES: !??B?BB?BBBBBFF?FFFH;FHFFHBG0C9AFHC?F=?CC?FF=C?EBFGGHDHHHFDDEDD@E!CFHHHIHHH??AEGFHC?FEFFFBCEGHHFHHFGHHHFHHFCD.@DDFHH?FFFF=C?BFFFDFF?BFD=;DDEEDEEEEEE;CCBEEEEB?B??B?C?B;E?EBA:/:AC?A:*?EACAA*?CEC;*/0*:?ACCAA?C?EEEEEE:A:*800:AA:AEE:)04??:A;8A?CA/0*::A
30 ---
31 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:17246:2253 1:N:0:14
32 SEQ: AGGGAATCTTGCACAATGGGGGAAACCCTGATGCAGCGATGCCGCGTGAGTGAAGAAGGCCCTTGGGTTGTAAAGCTCTTTCGTCGGGGAAGAAAATGACTGTACCCGAATAAGAAGGTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGAACTAGCGTAGTTCGGAATTACTGGGCTTAAAGAGTTCGTAGGTGGTTAAAAAAGTTGATGGTGAAATCCCAAGGCTCAACCTTGGAACT
33 SEQ_LEN: 249
34 SCORES: !???B-!-?!BBBBBFFF;!CEEECC;EFFH=EGBE=CEFHD@CDCE!+!5C=FBAEADHFEHHHHHHECCG=CD=CCF=DC=DDACEE5:DEEEECBECEC3?3;?B:@CEEECEEC?CC????E?CAAAE?ACEEEEEEEE????A;)::ACAEE?EA*8:CEE')08AECE?EEE?:??::ACE*?*?*:A/:*88A?A?CCAE:?C**4A/:AEC::*/0/?::?**0.)*:8:///::*/:?:?
35 ---
36 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:17246:2253 2:N:0:14
37 SEQ: CCTCTTCGCTACCCATGCTTTCGTTCCTCAGTGTCAGTAATGATCCAGAAAGTTGCCTTCGCTTTTGATGTTCTTTCTAATATCTACGAATTTCACCTCTACACTAGAAATTCCACTTTCCTCTATCATACTCTAGCTAAAAAGTTTTGATGGCAGTTCCAAGGTTGAGCCTTGGGATTTCACCATCAACTTTTTTAACCACCTACGAACTCTTTAAGCCCAGTAATTCCGAACTACGCTAGGTCCCTTC
38 SEQ_LEN: 250
39 SCORES: ?????BB??BBDBBBBBFFFFFHFHIIFFBD0A09CGFGG?0CDDGHDGFHHGEFGHHIIHE@CFHH+AEGHFHIIHHCEFHHHGDHHHIIHHIHBGGHHDGFHHHHBBGFFDDFDFHFCFFH?.CCFFHHHHFFFFFFDDBFEDDEEEEFE.4,?BA==A==*5=A,BB,A=CAACEEFEEF*AEEC0*AEEEC;C10**080??)88'ACECAA::::*8?C:?EF::?A)2A:*)'.84AAA0?EEA
40 ---
41 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:13072:2276 1:N:0:14
42 SEQ: GGGAATTTTGCGCAATGGGCGAAAGCCTGACGCAGCAACGCCGCGGGATCGAAGAAGCTCTGCGGAGTGTAAAGATCTGTCATAAGGGAAGAATAACGAGTATTCTAACAAAATATTCGTCTGACGGTACCTTATAAGAAAGCCACGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAGGGGGGCAAGCGTTATCCGGAATCATTGGGCGTAAAGGGGTCGTATGAGGACTGATCAG
43 SEQ_LEN: 239
44 SCORES: ?????B?BB!-5@BC9CFFB!+C!C!E?@B=!,!5!FE,!77!CE)!!:CD=@DEFHDDBCFFEE8:=@,BD=,3;BEEEE?;BCCECCCE?B;?B3:AA88?:**:CAAA88:::::??8*)AC).8?)*:???:0?CEAAE8**4;8;AA:??:8:??8?EE:AC?;42.)4?*::8).'''..'.8C8A)8AAE:A;?'0:?CAEE?8''4A8?*8'0)''8*0*/:C8:CEC?::
45 ---
46 SEQ_NAME: M01168:16:000000000-A1R9L:1:1101:13072:2276 2:N:0:14
47 SEQ: GTTTGCTCCCCACGCTTTCGTTCCTCAGCGTCAGTATAGGCCCAGTAAGCTGCCTTCGCCTTTGATGTTCCTCCTGATATCTACGCATTTCACCGCTACACCAGGAATTCCGCTTACCTCTACCTCACTCAAGACTGACAGTATTGAAACCGTTCCCCCGGTTAAGCCGCGGTCTTTTAATTCCAACTGATCAGT
48 SEQ_LEN: 195
49 SCORES: !!!!!-5-@@@@@CEEEEEEAACE/A!C-7@7CE999A.9AEEE+C=CFFD@BD@=E+9C5!EACC=A5CA@ED!CEDDEEEDDDDE9DDEEDDDDDCCEDE@D99DDD99;991D*3@9*2*0@;88*0**9@@@@;*87*;@8;(/;69'-///6(8'2-46;6(6'''.('/6((//..6666(66!!;!E!
50 ---