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refactoring of assemble_pairs
[biopieces.git] / bp_data / mouse_cytobands.txt
1 #chrom  chromStart      chromEnd        name    gieStain
2 chr1    0       8918386 qA1     gpos100
3 chr1    8918386 12386647        qA2     gneg
4 chr1    12386647        20314102        qA3     gpos33
5 chr1    20314102        22295965        qA4     gneg
6 chr1    22295965        31214352        qA5     gpos100
7 chr1    31214352        43601000        qB      gneg
8 chr1    43601000        54996715        qC1.1   gpos66
9 chr1    54996715        56483113        qC1.2   gneg
10 chr1    56483113        59951375        qC1.3   gpos75
11 chr1    59951375        65896965        qC2     gneg
12 chr1    65896965        75310818        qC3     gpos33
13 chr1    75310818        80760943        qC4     gneg
14 chr1    80760943        88192931        qC5     gpos33
15 chr1    88192931        100579579       qD      gneg
16 chr1    100579579       103552375       qE1.1   gpos33
17 chr1    103552375       104543306       qE1.2   gneg
18 chr1    104543306       113461693       qE2.1   gpos100
19 chr1    113461693       114948091       qE2.2   gneg
20 chr1    114948091       126839272       qE2.3   gpos100
21 chr1    126839272       129812068       qE3     gneg
22 chr1    129812068       140712318       qE4     gpos66
23 chr1    140712318       148639772       qF      gneg
24 chr1    148639772       153098966       qG1     gpos100
25 chr1    153098966       154089897       qG2     gneg
26 chr1    154089897       158549091       qG3     gpos100
27 chr1    158549091       161521886       qH1     gneg
28 chr1    161521886       165485613       qH2.1   gpos33
29 chr1    165485613       166972011       qH2.2   gneg
30 chr1    166972011       171431204       qH2.3   gpos33
31 chr1    171431204       177376795       qH3     gneg
32 chr1    177376795       183322386       qH4     gpos33
33 chr1    183322386       189763443       qH5     gneg
34 chr1    189763443       197195432       qH6     gpos33
35 chr2    0       14052687        qA1     gpos100
36 chr2    14052687        16394801        qA2     gneg
37 chr2    16394801        29042220        qA3     gpos33
38 chr2    29042220        48247559        qB      gneg
39 chr2    48247559        60426554        qC1.1   gpos100
40 chr2    60426554        60894977        qC1.2   gneg
41 chr2    60894977        68389744        qC1.3   gpos100
42 chr2    68389744        71668704        qC2     gneg
43 chr2    71668704        81037162        qC3     gpos66
44 chr2    81037162        88531928        qD      gneg
45 chr2    88531928        101179347       qE1     gpos100
46 chr2    101179347       104926730       qE2     gneg
47 chr2    104926730       112889920       qE3     gpos33
48 chr2    112889920       115700457       qE4     gneg
49 chr2    115700457       123663646       qE5     gpos66
50 chr2    123663646       131626836       qF1     gneg
51 chr2    131626836       134437373       qF2     gpos33
52 chr2    134437373       140995294       qF3     gneg
53 chr2    140995294       146616369       qG1     gpos100
54 chr2    146616369       147553214       qG2     gneg
55 chr2    147553214       152237444       qG3     gpos100
56 chr2    152237444       158795364       qH1     gneg
57 chr2    158795364       163011170       qH2     gpos33
58 chr2    163011170       173316474       qH3     gneg
59 chr2    173316474       181748087       qH4     gpos33
60 chr3    0       18490218        qA1     gpos100
61 chr3    18490218        20436557        qA2     gneg
62 chr3    20436557        35520683        qA3     gpos66
63 chr3    35520683        46712131        qB      gneg
64 chr3    46712131        56443825        qC      gpos100
65 chr3    56443825        60823088        qD      gneg
66 chr3    60823088        69581612        qE1     gpos33
67 chr3    69581612        72501120        qE2     gneg
68 chr3    72501120        83692569        qE3     gpos100
69 chr3    83692569        92937678        qF1     gneg
70 chr3    92937678        97316940        qF2.1   gpos33
71 chr3    97316940        106075465       qF2.2   gneg
72 chr3    106075465       108021804       qF2.3   gpos33
73 chr3    108021804       114833990       qF3     gneg
74 chr3    114833990       126512023       qG1     gpos100
75 chr3    126512023       128458361       qG2     gneg
76 chr3    128458361       138190056       qG3     gpos66
77 chr3    138190056       143542487       qH1     gneg
78 chr3    143542487       147921750       qH2     gpos33
79 chr3    147921750       153760766       qH3     gneg
80 chr3    153760766       159599783       qH4     gpos33
81 chr4    0       14799183        qA1     gpos100
82 chr4    14799183        17663541        qA2     gneg
83 chr4    17663541        28166187        qA3     gpos100
84 chr4    28166187        30075759        qA4     gneg
85 chr4    30075759        43442763        qA5     gpos66
86 chr4    43442763        51558444        qB1     gneg
87 chr4    51558444        54900195        qB2     gpos33
88 chr4    54900195        63015876        qB3     gneg
89 chr4    63015876        69221985        qC1     gpos33
90 chr4    69221985        71608950        qC2     gneg
91 chr4    71608950        83543776        qC3     gpos100
92 chr4    83543776        89272492        qC4     gneg
93 chr4    89272492        96910780        qC5     gpos66
94 chr4    96910780        105026461       qC6     gneg
95 chr4    105026461       110277784       qC7     gpos66
96 chr4    110277784       116961286       qD1     gneg
97 chr4    116961286       119825644       qD2.1   gpos33
98 chr4    119825644       130328290       qD2.2   gneg
99 chr4    130328290       133192648       qD2.3   gpos33
100 chr4    133192648       140830936       qD3     gneg
101 chr4    140830936       147037045       qE1     gpos100
102 chr4    147037045       155630120       qE2     gneg
103 chr5    0       14964098        qA1     gpos100
104 chr5    14964098        16412236        qA2     gneg
105 chr5    16412236        25583780        qA3     gpos66
106 chr5    25583780        33789899        qB1     gneg
107 chr5    33789899        35720750        qB2     gpos33
108 chr5    35720750        50684848        qB3     gneg
109 chr5    50684848        58890967        qC1     gpos33
110 chr5    58890967        61304531        qC2     gneg
111 chr5    61304531        71924213        qC3.1   gpos100
112 chr5    71924213        73855065        qC3.2   gneg
113 chr5    73855065        78199480        qC3.3   gpos66
114 chr5    78199480        82061183        qD      gneg
115 chr5    82061183        91715440        qE1     gpos100
116 chr5    91715440        94129004        qE2     gneg
117 chr5    94129004        99921558        qE3     gpos33
118 chr5    99921558        102335123       qE4     gneg
119 chr5    102335123       108127677       qE5     gpos33
120 chr5    108127677       125505339       qF      gneg
121 chr5    125505339       127436191       qG1.1   gpos33
122 chr5    127436191       128401616       qG1.2   gneg
123 chr5    128401616       131297893       qG1.3   gpos33
124 chr5    131297893       146744704       qG2     gneg
125 chr5    146744704       152537259       qG3     gpos33
126 chr6    0       16613004        qA1     gpos100
127 chr6    16613004        21499181        qA2     gneg
128 chr6    21499181        27362595        qA3.1   gpos100
129 chr6    27362595        28339830        qA3.2   gneg
130 chr6    28339830        34203243        qA3.3   gpos100
131 chr6    34203243        41532510        qB1     gneg
132 chr6    41532510        44464216        qB2.1   gpos66
133 chr6    44464216        45930070        qB2.2   gneg
134 chr6    45930070        50816247        qB2.3   gpos66
135 chr6    50816247        62543074        qB3     gneg
136 chr6    62543074        74269900        qC1     gpos100
137 chr6    74269900        76712989        qC2     gneg
138 chr6    76712989        85996727        qC3     gpos66
139 chr6    85996727        94303229        qD1     gneg
140 chr6    94303229        95769082        qD2     gpos33
141 chr6    95769082        103098349       qD3     gneg
142 chr6    103098349       108473144       qE1     gpos100
143 chr6    108473144       109450380       qE2     gneg
144 chr6    109450380       116779646       qE3     gpos100
145 chr6    116779646       122643059       qF1     gneg
146 chr6    122643059       125086148       qF2     gpos33
147 chr6    125086148       131926797       qF3     gneg
148 chr6    131926797       139256063       qG1     gpos66
149 chr6    139256063       142676388       qG2     gneg
150 chr6    142676388       149517037       qG3     gpos33
151 chr7    0       15943333        qA1     gpos100
152 chr7    15943333        19131999        qA2     gneg
153 chr7    19131999        29760888        qA3     gpos33
154 chr7    29760888        36138221        qB1     gneg
155 chr7    36138221        39326888        qB2     gpos33
156 chr7    39326888        49955776        qB3     gneg
157 chr7    49955776        56864554        qB4     gpos33
158 chr7    56864554        63773332        qB5     gneg
159 chr7    63773332        74933665        qC      gpos100
160 chr7    74933665        80779554        qD1     gneg
161 chr7    80779554        84499665        qD2     gpos66
162 chr7    84499665        94597109        qD3     gneg
163 chr7    94597109        104694553       qE1     gpos100
164 chr7    104694553       107351775       qE2     gneg
165 chr7    107351775       116917775       qE3     gpos33
166 chr7    116917775       124357997       qF1     gneg
167 chr7    124357997       129140997       qF2     gpos33
168 chr7    129140997       144021442       qF3     gneg
169 chr7    144021442       147741553       qF4     gpos33
170 chr7    147741553       152524553       qF5     gneg
171 chr8    0       16228701        qA1.1   gpos100
172 chr8    16228701        17183331        qA1.2   gneg
173 chr8    17183331        20524534        qA1.3   gpos33
174 chr8    20524534        30070829        qA2     gneg
175 chr8    30070829        34366662        qA3     gpos33
176 chr8    34366662        44867586        qA4     gneg
177 chr8    44867586        49163419        qB1.1   gpos66
178 chr8    49163419        51072678        qB1.2   gneg
179 chr8    51072678        56800455        qB1.3   gpos66
180 chr8    56800455        60618973        qB2     gneg
181 chr8    60618973        68256009        qB3.1   gpos100
182 chr8    68256009        69210638        qB3.2   gneg
183 chr8    69210638        75893045        qB3.3   gpos100
184 chr8    75893045        81620822        qC1     gneg
185 chr8    81620822        86393969        qC2     gpos33
186 chr8    86393969        91644432        qC3     gneg
187 chr8    91644432        93076376        qC4     gpos33
188 chr8    93076376        97372209        qC5     gneg
189 chr8    97372209        105009245       qD1     gpos100
190 chr8    105009245       105963874       qD2     gneg
191 chr8    105963874       112646281       qD3     gpos33
192 chr8    112646281       126011094       qE1     gneg
193 chr8    126011094       131738871       qE2     gpos33
194 chr9    0       14352094        qA1     gpos100
195 chr9    14352094        19444773        qA2     gneg
196 chr9    19444773        24074481        qA3     gpos33
197 chr9    24074481        37963604        qA4     gneg
198 chr9    37963604        43982225        qA5.1   gpos66
199 chr9    43982225        46297079        qA5.2   gneg
200 chr9    46297079        54630553        qA5.3   gpos66
201 chr9    54630553        62964027        qB      gneg
202 chr9    62964027        69445618        qC      gpos33
203 chr9    69445618        77316122        qD      gneg
204 chr9    77316122        82408800        qE1     gpos33
205 chr9    82408800        84260683        qE2     gneg
206 chr9    84260683        90742275        qE3.1   gpos100
207 chr9    90742275        91205245        qE3.2   gneg
208 chr9    91205245        100464661       qE3.3   gpos100
209 chr9    100464661       101390603       qE4     gpos66
210 chr9    101390603       107872194       qF1     gneg
211 chr9    107872194       110650019       qF2     gpos33
212 chr9    110650019       119446464       qF3     gneg
213 chr9    119446464       124076172       qF4     gpos33
214 chrX    0       15368327        qA1.1   gpos100
215 chrX    15368327        17769628        qA1.2   gneg
216 chrX    17769628        20651189        qA1.3   gpos33
217 chrX    20651189        27374832        qA2     gneg
218 chrX    27374832        32657694        qA3.1   gpos66
219 chrX    32657694        33618215        qA3.2   gneg
220 chrX    33618215        38901077        qA3.3   gpos66
221 chrX    38901077        46585241        qA4     gneg
222 chrX    46585241        54749664        qA5     gpos66
223 chrX    54749664        61473308        qA6     gneg
224 chrX    61473308        67716690        qA7.1   gpos66
225 chrX    67716690        69157471        qA7.2   gneg
226 chrX    69157471        75400854        qA7.3   gpos66
227 chrX    75400854        80203456        qB      gneg
228 chrX    80203456        88848140        qC1     gpos100
229 chrX    88848140        89808660        qC2     gneg
230 chrX    89808660        98453344        qC3     gpos100
231 chrX    98453344        107098028       qD      gneg
232 chrX    107098028       117183493       qE1     gpos100
233 chrX    117183493       118144013       qE2     gneg
234 chrX    118144013       131591300       qE3     gpos100
235 chrX    131591300       137834682       qF1     gneg
236 chrX    137834682       145038586       qF2     gpos33
237 chrX    145038586       152242489       qF3     gneg
238 chrX    152242489       159446392       qF4     gpos33
239 chrX    159446392       166650296       qF5     gneg
240 chrY    0       3578074 qA1     gpos100
241 chrY    3578074 5665285 qA2     gpos66
242 chrY    5665285 7851886 qB      gpos33
243 chrY    7851886 9442142 qC1     gpos100
244 chrY    9442142 10734224        qC2     gpos33
245 chrY    10734224        12523262        qC3     gpos100
246 chrY    12523262        14411690        qD      gpos33
247 chrY    14411690        15902555        qE      gpos66
248 chr10   0       12754055        qA1     gpos100
249 chr10   12754055        17659461        qA2     gneg
250 chr10   17659461        23545948        qA3     gpos33
251 chr10   23545948        33356759        qA4     gneg
252 chr10   33356759        41205409        qB1     gpos100
253 chr10   41205409        48072977        qB2     gneg
254 chr10   48072977        55921626        qB3     gpos100
255 chr10   55921626        63770276        qB4     gneg
256 chr10   63770276        67694600        qB5.1   gpos100
257 chr10   67694600        68185141        qB5.2   gneg
258 chr10   68185141        74562168        qB5.3   gpos100
259 chr10   74562168        88787845        qC1     gneg
260 chr10   88787845        95655414        qC2     gpos33
261 chr10   95655414        98598657        qC3     gneg
262 chr10   98598657        111352712       qD1     gpos100
263 chr10   111352712       124106767       qD2     gneg
264 chr10   124106767       129993255       qD3     gpos33
265 chr11   0       13021480        qA1     gpos100
266 chr11   13021480        17206956        qA2     gneg
267 chr11   17206956        21857485        qA3.1   gpos100
268 chr11   21857485        25577908        qA3.2   gneg
269 chr11   25577908        30228437        qA3.3   gpos100
270 chr11   30228437        36274125        qA4     gneg
271 chr11   36274125        43249918        qA5     gpos100
272 chr11   43249918        47900447        qB1.1   gneg
273 chr11   47900447        49760658        qB1.2   gpos33
274 chr11   49760658        59991822        qB1.3   gneg
275 chr11   59991822        62782139        qB2     gpos33
276 chr11   62782139        70688038        qB3     gneg
277 chr11   70688038        73943408        qB4     gpos33
278 chr11   73943408        81849307        qB5     gneg
279 chr11   81849307        90220259        qC      gpos100
280 chr11   90220259        102311634       qD      gneg
281 chr11   102311634       110217533       qE1     gpos66
282 chr11   110217533       121843856       qE2     gneg
283 chr12   0       17766671        qA1.1   gpos100
284 chr12   17766671        21320005        qA1.2   gneg
285 chr12   21320005        26205839        qA1.3   gpos66
286 chr12   26205839        31980007        qA2     gneg
287 chr12   31980007        39530843        qA3     gpos33
288 chr12   39530843        44416677        qB1     gneg
289 chr12   44416677        45305011        qB2     gpos33
290 chr12   45305011        52411679        qB3     gneg
291 chr12   52411679        66625016        qC1     gpos100
292 chr12   66625016        71955017        qC2     gneg
293 chr12   71955017        81726686        qC3     gpos100
294 chr12   81726686        86168354        qD1     gneg
295 chr12   86168354        89277522        qD2     gpos33
296 chr12   89277522        96384190        qD3     gneg
297 chr12   96384190        107044193       qE      gpos100
298 chr12   107044193       115483361       qF1     gneg
299 chr12   115483361       121257530       qF2     gpos66
300 chr13   0       16267960        qA1     gpos100
301 chr13   16267960        21197645        qA2     gneg
302 chr13   21197645        29578109        qA3.1   gpos66
303 chr13   29578109        33028888        qA3.2   gneg
304 chr13   33028888        41409353        qA3.3   gpos33
305 chr13   41409353        44367164        qA4     gneg
306 chr13   44367164        52747628        qA5     gpos33
307 chr13   52747628        59156219        qB1     gneg
308 chr13   59156219        61621061        qB2     gpos33
309 chr13   61621061        69508557        qB3     gneg
310 chr13   69508557        78381990        qC1     gpos33
311 chr13   78381990        80846832        qC2     gneg
312 chr13   80846832        94649950        qC3     gpos100
313 chr13   94649950        106481194       qD1     gneg
314 chr13   106481194       110424942       qD2.1   gpos33
315 chr13   110424942       116340564       qD2.2   gneg
316 chr13   116340564       120284312       qD2.3   gpos33
317 chr14   0       15023383        qA1     gpos100
318 chr14   15023383        19530398        qA2     gneg
319 chr14   19530398        30046767        qA3     gpos33
320 chr14   30046767        43567812        qB      gneg
321 chr14   43567812        52081063        qC1     gpos100
322 chr14   52081063        55085740        qC2     gneg
323 chr14   55085740        60093534        qC3     gpos66
324 chr14   60093534        69107564        qD1     gneg
325 chr14   69107564        73113800        qD2     gpos33
326 chr14   73113800        85132507        qD3     gneg
327 chr14   85132507        89138743        qE1     gpos66
328 chr14   89138743        99154332        qE2.1   gpos100
329 chr14   99154332        100155891       qE2.2   gneg
330 chr14   100155891       107667583       qE2.3   gpos100
331 chr14   107667583       111173039       qE3     gneg
332 chr14   111173039       121188628       qE4     gpos100
333 chr14   121188628       125194864       qE5     gneg
334 chr15   0       16413299        qA1     gpos100
335 chr15   16413299        24164024        qA2     gneg
336 chr15   24164024        29635124        qB1     gpos33
337 chr15   29635124        31914749        qB2     gneg
338 chr15   31914749        42856949        qB3.1   gpos100
339 chr15   42856949        44680649        qB3.2   gneg
340 chr15   44680649        49695824        qB3.3   gpos66
341 chr15   49695824        53343224        qC      gneg
342 chr15   53343224        66109124        qD1     gpos100
343 chr15   66109124        68388749        qD2     gneg
344 chr15   68388749        77051324        qD3     gpos66
345 chr15   77051324        83434274        qE1     gneg
346 chr15   83434274        86625749        qE2     gpos33
347 chr15   86625749        95288324        qE3     gneg
348 chr15   95288324        100759424       qF1     gpos66
349 chr15   100759424       101671274       qF2     gneg
350 chr15   101671274       103494974       qF3     gpos33
351 chr16   0       15450152        qA1     gpos100
352 chr16   15450152        16386525        qA2     gneg
353 chr16   16386525        20600202        qA3     gpos33
354 chr16   20600202        26218440        qB1     gneg
355 chr16   26218440        32304863        qB2     gpos33
356 chr16   32304863        38391287        qB3     gneg
357 chr16   38391287        44945897        qB4     gpos33
358 chr16   44945897        53841439        qB5     gneg
359 chr16   53841439        58055117        qC1.1   gpos66
360 chr16   58055117        58991490        qC1.2   gneg
361 chr16   58991490        66950659        qC1.3   gpos66
362 chr16   66950659        70696150        qC2     gneg
363 chr16   70696150        79123506        qC3.1   gpos100
364 chr16   79123506        79591692        qC3.2   gneg
365 chr16   79591692        91764540        qC3.3   gpos100
366 chr16   91764540        98319150        qC4     gneg
367 chr17   0       13984976        qA1     gpos100
368 chr17   13984976        16170128        qA2     gneg
369 chr17   16170128        17481220        qA3.1   gpos33
370 chr17   17481220        21851525        qA3.2   gneg
371 chr17   21851525        31466196        qA3.3   gpos66
372 chr17   31466196        40206806        qB1     gneg
373 chr17   40206806        41517898        qB2     gpos33
374 chr17   41517898        45888203        qB3     gneg
375 chr17   45888203        55939905        qC      gpos66
376 chr17   55939905        60310210        qD      gneg
377 chr17   60310210        68176759        qE1.1   gpos100
378 chr17   68176759        69050820        qE1.2   gneg
379 chr17   69050820        73421125        qE1.3   gpos100
380 chr17   73421125        78665491        qE2     gneg
381 chr17   78665491        83035796        qE3     gpos33
382 chr17   83035796        89154223        qE4     gneg
383 chr17   89154223        95272651        qE5     gpos33
384 chr18   0       19420992        qA1     gpos100
385 chr18   19420992        29553684        qA2     gneg
386 chr18   29553684        35464421        qB1     gpos66
387 chr18   35464421        37153203        qB2     gneg
388 chr18   37153203        45597113        qB3     gpos100
389 chr18   45597113        49819068        qC      gneg
390 chr18   49819068        54041023        qD1     gpos100
391 chr18   54041023        54463218        qD2     gneg
392 chr18   54463218        60796150        qD3     gpos100
393 chr18   60796150        67973474        qE1     gneg
394 chr18   67973474        75150797        qE2     gpos33
395 chr18   75150797        83594707        qE3     gneg
396 chr18   83594707        90772031        qE4     gpos33
397 chr19   0       16655891        qA      gpos100
398 chr19   16655891        25593199        qB      gneg
399 chr19   25593199        34936748        qC1     gpos66
400 chr19   34936748        38186678        qC2     gneg
401 chr19   38186678        47530227        qC3     gpos66
402 chr19   47530227        51592639        qD1     gneg
403 chr19   51592639        58904982        qD2     gpos33
404 chr19   58904982        61342430        qD3     gneg