// Marth Lab, Department of Biology, Boston College\r
// All rights reserved.\r
// ---------------------------------------------------------------------------\r
-// Last modified: 3 September 2010 (DB)\r
+// Last modified: 7 September 2010 (DB)\r
// ---------------------------------------------------------------------------\r
// Uses BGZF routines were adapted from the bgzf.c code developed at the Broad\r
// Institute.\r
\r
// create index based on type requested\r
if ( useStandardIndex ) \r
- NewIndex = new BamDefaultIndex(&mBGZF, Parent, IsBigEndian);\r
+ NewIndex = new BamStandardIndex(&mBGZF, Parent, IsBigEndian);\r
// create BamTools 'custom' index\r
else\r
NewIndex = new BamToolsIndex(&mBGZF, Parent, IsBigEndian);\r