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more verbose grab output
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2009-09-18 martinahansenadded align_two_seq.c
2009-09-18 martinahansenfixed issue 18
2009-08-27 martinahansenworking on AlignTwoSeq
2009-08-10 martinahansendisabled utest for C code
2009-07-21 martinahansenadded test_common.c
2009-07-10 martinahansenfixed bug in remove_indels
2009-07-10 martinahansenmucking with c and makefiles
2009-05-24 martinahansenmigrated assemble_tag_contigs
2008-12-11 martinahansenfixed carriage return bug in read_ucsc_config
2008-12-08 martinahansenminor fixes
2008-12-08 martinahansenmade check_bed optional
2008-12-05 martinahansenchanged barray from ushort to uint
2008-12-05 martinahansenadded bed2tag_contigs as backend to assemble_tag_contigs
2008-12-05 martinahansenadded bed2tag_contigs.c
2008-12-05 martinahansenfixed bed2fixedstep.c
2008-12-04 martinahansenadded python code
2008-12-04 martinahansenadded bed2fixedstep.c
2008-11-30 martinahansenadded barray.c and cleaned hash.c
2008-09-29 martinahansentada
2008-09-25 martinahansenfixed rename bug
2008-09-24 martinahansenadding rescan to bipartite_scan
2008-09-23 martinahansenadd bipartite_decode
2008-09-23 martinahansenadd bipartite_decode
2008-09-16 martinahanseninline::c code for adaptor removal
2008-09-16 martinahansenminor updates
2008-09-11 martinahansenbed_sort created
2008-09-11 martinahansenadded bed stuff to c code
2008-09-10 martinahansenadded copyright to c stuff
2008-09-10 martinahansenbipartite_scan polish2
2008-09-10 martinahansenlinked list sort added
2008-09-10 martinahansenbipartite_scan polish
2008-09-08 martinahansenfixed 0 offset bug in remove_adaptor
2008-09-08 martinahansenadded sort to bipartite_scan.c
2008-09-05 martinahansenbipartite_scan now working
2008-09-05 martinahansenadded c temp file dir
2008-09-05 martinahansenadded unit test to mem.c
2008-09-04 martinahansenbipartite_scan.c alpha
2008-09-03 martinahansenadded calc_fixedstep biopiece
2008-09-01 martinahansenread_solexa now handles both decimal and octal scores
2008-08-29 martinahansenadded remove_adaptor biopiece
2008-08-28 martinahansenread_fasta fix for stupid \r
2008-08-26 martinahansenmade speedup for repeat-O-matic
2008-08-26 martinahansenadded fixedStep format to upload_to_ucsc
2008-08-25 martinahansenclean-write of repeat-O-matic
2008-08-25 martinahansenadded --verbose run option for blast_seq
2008-08-25 martinahansenadded revcomp_dna to repeat-O-matic
2008-08-22 martinahansenadded option to read_soft for selecting specific samples
2008-08-21 martinahansenfinished c fasta parser
2008-08-21 martinahansenfinished c fasta parser
2008-08-21 martinahansenfixed bug in vmatch_index
2008-08-21 martinahansenmore updates of c and fixes to upload_to_ucsc
2008-08-18 martinahansenanother c code upgrade
2008-08-14 martinahansenupdated read_solexa
2008-08-14 martinahansenunit test of mem.c done
2008-08-13 martinahansenupdate of c libs
2008-08-05 martinahansenfixing up c code
2008-07-21 martinahansenupdated upload_to_ucsc wiki and added a secure free...
2008-07-21 martinahansenchanged wib dir from BP_DATA to ~/ucsc
2008-07-20 martinahansenadded a variable argument list example to c scr
2008-07-20 martinahansencleaning c source dir
2008-06-26 martinahansenHere we go