fixed minor issue in align.rb tests

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1768 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/code_ruby/lib/maasha/align.rb b/code_ruby/lib/maasha/align.rb
index 2619fb56fa1386229f1c74281f2aac70393abe61..cdab55b0394d6fa7d00785123f95afa076653b55 100755 (executable)
--- a/code_ruby/lib/maasha/align.rb
+++ b/code_ruby/lib/maasha/align.rb
@@ -165,8 +165,8 @@ class Align
 
     cons_entry = cons.consensus 
 
-    output << " " * (max_name + 3) + cons_entry.seq + $/
-    output << " " * (max_name + 3) + cons_entry.qual.tr("[@-h]", "           ..........ooooooooooOOOOOOOOOO") unless cons_entry.qual.nil?
+    output << " " * (max_name + 3) + cons_entry.seq
+    output << $/ + " " * (max_name + 3) + cons_entry.qual.tr("[@-h]", "           ..........ooooooooooOOOOOOOOOO") unless cons_entry.qual.nil?
     output
   end