fixed default cast for lists in biopieces.rb

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1370 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/code_ruby/Maasha/lib/biopieces.rb b/code_ruby/Maasha/lib/biopieces.rb
index e8486c329c2f4c34030d0b7ecf790452a44c4bbf..8ee242342dcb0f6198667f9005f2ca38b185990c 100644 (file)
--- a/code_ruby/Maasha/lib/biopieces.rb
+++ b/code_ruby/Maasha/lib/biopieces.rb
@@ -374,7 +374,13 @@ class OptionHandler
   def options_default
     @casts.each do |cast|
       if cast[:default]
-        @options[cast[:long]] = cast[:default] unless @options.has_key? cast[:long]
+        unless @options.has_key? cast[:long]
+          if cast[:type] == 'list'
+            @options[cast[:long]] = cast[:default].split ','
+          else
+            @options[cast[:long]] = cast[:default]
+          end
+        end
       end
     end
   end