fixed ugly bug in trim.rb

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1829 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/code_ruby/lib/maasha/seq/trim.rb b/code_ruby/lib/maasha/seq/trim.rb
index ad8c6930e507729d41336b99adc1e16b7148f1f9..a11159bd5cfd065c7f4f1a89ec540d591f01047f 100644 (file)
--- a/code_ruby/lib/maasha/seq/trim.rb
+++ b/code_ruby/lib/maasha/seq/trim.rb
@@ -132,7 +132,7 @@ module Trim
         {
           c = 0;
 
-          while ((c < min_len) && ((c + i) < len) && (qual[len - (c + i) - 1] - score_base > min_qual))
+          while ((c < min_len) && ((c + i) < len) && (qual[len - (c + i) - 1] - score_base >= min_qual))
             c++;
 
           if (c == min_len)
@@ -170,7 +170,7 @@ module Trim
         {
           c = 0;
 
-          while ((c < min_len) && ((c + i) < len) && (qual[c + i] - score_base > min_qual))
+          while ((c < min_len) && ((c + i) < len) && (qual[c + i] - score_base >= min_qual))
             c++;
 
           if (c == min_len)