fixed SEQ_LEN bug in transliterate_seq

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1200 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/bp_bin/transliterate_seq b/bp_bin/transliterate_seq
index a81d328d9a99ac54936a086caff7c03c3b7f993d..14dcb299f9ee0aecbd71af38fab9781119138941 100755 (executable)
--- a/bp_bin/transliterate_seq
+++ b/bp_bin/transliterate_seq
@@ -59,6 +59,8 @@ while ( $record = Maasha::Biopieces::get_record( $in ) )
             eval "\$record->{ 'SEQ' } =~ tr/$search/$replace/";
         } elsif ( $delete ) {
             eval "\$record->{ 'SEQ' } =~ tr/$delete//d";
+
+            $record->{ "SEQ_LEN" } = length $record->{ "SEQ" };
         }
     }