added S_LEN to find_gaps

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1203 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/bp_bin/find_gaps b/bp_bin/find_gaps
index b39b22b0dd0570189f75ce1506a7ae8891f87923..f885f82ff74a99d496230c2029e545441cdf73ba 100755 (executable)
--- a/bp_bin/find_gaps
+++ b/bp_bin/find_gaps
@@ -106,6 +106,7 @@ sub find_gaps
         push @gaps, {
             S_BEG => $beg,
             S_END => $end - 1,
+            S_LEN => $end - $beg,
         };
 
         $beg = $end + 1;