*/
#include "treecalculator.h"
-#include "treemap.h"
+#include "counttable.h"
/***********************************************************************/
map< vector<string>, set<int> > rootForGrouping; //maps a grouping combo to the root for that combo
bool includeRoot;
- EstOutput driver(Tree*, vector< vector<string> >, int, int, TreeMap*);
- EstOutput createProcesses(Tree*, vector< vector<string> >, TreeMap*);
+ EstOutput driver(Tree*, vector< vector<string> >, int, int, CountTable*);
+ EstOutput createProcesses(Tree*, vector< vector<string> >, CountTable*);
double getLengthToRoot(Tree*, int, string, string);
};