added trim.seqs command

[mothur.git] / validparameter.h

diff --git a/validparameter.h b/validparameter.h
index 61b1c5b2d90ee0e805bc205c5fe8b19b5a4a5c97..ff886efa6294f20e3ab53666a448afbe4db8ff07 100644 (file)
--- a/validparameter.h
+++ b/validparameter.h
@@ -9,10 +9,8 @@
  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  *
  */
-using namespace std;
 
 #include "mothur.h"
-#include "utilities.hpp"
 
 //This class contains a list of all valid parameters in Mothur.  
 //It has a function which will tell you if your parameter is valid.
@@ -31,23 +29,6 @@ class ValidParameters {
                void initParameterRanges();
 
        private:
-               map<string, string> readdist;
-               map<string, string> readotu;
-               map<string, string> readtree;
-               map<string, string> cluster;
-               map<string, string> deconvolute;
-               map<string, string> parsimony;
-               map<string, string> collectsingle;
-               map<string, string> collectshared;
-               map<string, string> rarefactsingle;
-               map<string, string> rarefactshared;
-               map<string, string> summarysingle;
-               map<string, string> summaryshared;
-               map<string, string> unifracweighted;
-               map<string, string> unifracunweighted;
-               map<string, string> libshuff;
-               map<string, string> heatmap;
-               
                map<string, string>::iterator it;
                map<string, vector<string> > commandParameters;
                map<string, vector<string> > parameterRanges;