]> git.donarmstrong.com Git - mothur.git/blobdiff - validcalculator.h
started adding chimeraslayer method and fixed minor bug in treegroupscommand deconstr...
[mothur.git] / validcalculator.h
index 6cf37924144906276a9aa39c491ffed301c35510..320f9822662f842faecec103ef29ba75495e77af 100644 (file)
@@ -9,7 +9,6 @@
  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  *
  */
-using namespace std;
 
 #include "mothur.h"
 
@@ -23,6 +22,7 @@ class ValidCalculators {
                ValidCalculators();
                ~ValidCalculators();
                bool isValidCalculator(string, string);
+               void printCalc(string, ostream&);
                
        private:
                map<string, string> single;
@@ -34,6 +34,10 @@ class ValidCalculators {
                map<string, string> vennsingle;
                map<string, string> vennshared;
                map<string, string> treegroup;
+               map<string, string> matrix;
+               map<string, string> heat;
+               map<string, string> boot;
+               map<string, string> distance;
                map<string, string>::iterator it;
                
                void initialSingle();
@@ -45,6 +49,10 @@ class ValidCalculators {
                void initialVennSingle();
                void initialVennShared();
                void initialTreeGroups();
+               void initialMatrix();
+               void initialBoot();
+               void initialDistance();
+               void initialHeat();
 };
 
 #endif