filterseqscommand added

[mothur.git] / validcalculator.cpp

diff --git a/validcalculator.cpp b/validcalculator.cpp
index 72d404147a3b71bf9a6b1efe82098f943558adf4..f6fe280a86474ea35e78a18245ac24a0ba5e5349 100644 (file)
--- a/validcalculator.cpp
+++ b/validcalculator.cpp
@@ -186,9 +186,9 @@ void ValidCalculators::initialSingle() {
                single["logseries"]         = "logseries";
                single["qstat"]         = "qstat";
                single["bstick"]        = "bstick";
+               single["goodscoverage"] = "goodscoverage";
                single["nseqs"]                 = "nseqs";
                single["coverage"]              = "coverage";
-               
                single["default"]           = "default";
        }
        catch(exception& e) {
@@ -280,6 +280,7 @@ void ValidCalculators::initialSummary() {
                summary["qstat"]        = "qstat";
                summary["bstick"]       = "bstick";
                summary["nseqs"]                = "nseqs";
+               summary["goodscoverage"]= "goodscoverage";
                summary["coverage"]             = "coverage";
                summary["default"]          = "default";
        }
@@ -398,6 +399,7 @@ void ValidCalculators::initialTreeGroups() {
                treegroup["thetayc"]                            = "thetayc";
                treegroup["thetan"]                                     = "thetan";
                treegroup["morisitahorn"]                       = "morisitahorn";
+               treegroup["braycurtis"]                 = "braycurtis";
        }
        catch(exception& e) {
                cout << "Standard Error: " << e.what() << " has occurred in the ValidCalculator class Function initialTreeGroups. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
@@ -420,6 +422,7 @@ void ValidCalculators::initialBoot() {
                boot["thetayc"]                         = "thetayc";
                boot["thetan"]                          = "thetan";
                boot["morisitahorn"]            = "morisitahorn";
+               boot["braycurtis"]                      = "braycurtis";
        }
        catch(exception& e) {
                cout << "Standard Error: " << e.what() << " has occurred in the ValidCalculator class Function initialBoot. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";